Job Description P05824 Confidence 99.45% Date Thu Jan 5 10:58:56 GMT 2012 Rank 68 Aligned Residues 414 % Identity 13% Template c3eukC_ PDB info PDB header:cell cycle Chain: C: PDB Molecule:chromosome partition protein mukb, linker; PDBTitle: crystal structure of muke-mukf(residues 292-443)-mukb(head2 domain)-atpgammas complex, asymmetric dimer Resolution 4.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	Q	L	T	I	S	N	F	A	I	V	R	E	L	E	I	D	F	H	S	G	M	T	V	I	T	G	E	T	G	A	G	K	S	I	A	I	D	A	L	G	L	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	R	A	E	A	D	M	V	R	T	G	A	A	R	A	D	L
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	S	L	T	L	I	N	W	N	G	F	F	A	R	T	F	D	F	D	E	L	V	T	T	L	S	G	G	N	G	A	G	K	S	T	T	M	A	G	F	V	T	A	L	I	P	D	L	T	L	L	N	F	R	N	T	T	E	A	G	S	T	S	S	D	K	G	L	Y	G	K	L	K	A	G	V	C	Y	A
Template Known Secondary structure											T	T							B			S	S	B							T	T	S	S																T	T	T						T	T		S	S							S	T	T	T	T	B		S	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		C	A	R	F	S	L	K	D	T	P	A	A	L	R	W	L	E	E	N	Q	L	E	D	.	G	H	E	C	L	L	R	R	V	I	S	S	D	G	R	S	R	G	F	I	N	G	T	A	V	P	L	S	Q	L	R	E	L	G	Q	L	L	I	Q	I	H	G	Q	H	A	H	Q	L	L	T	K	P	E	H	Q	K
Query Conservation																									.
Alig confidence																									.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	E	T	V	N	S	R	A	Q	R	I	I	T	G	V	R	L	Q	Q	I	A	G	R	D	K	K	V	D	I	R	P	F	S	L	Q	N	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	D	S	V	I	S	L	F	T	E	Q	V	A	N	K	A	R	V	L	S	L	N	D	L	K
Template Known Secondary structure								T	T															T	T	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		G	G	G	G	S				B	T	T	B
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	L	D	G	Y	A	N	E	T	S	L	L	Q	E	M	T	A	R	Y	Q	L	W	H	Q	S	C	R	D	L	A	H	H	Q	Q	L	S	Q	E	R	A	A	R	A	E	L	L	Q	Y	Q	L	K	E	L	N	E	F	N	P	Q	P	G	E	F	E	Q	I	D	E	E	Y	K	R	L	A	N	S	G	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	F	E	E	T	A	V	T	F	K	P	Y	H	S	I	T	D	Y	H	S	F	M	F	D	L	G	I	L	P	K	R	L	R	S	S	S	D	R	N	K	F	Y	K	L	I	E	A	S	L	Y	G	G	I	S	S	V	I	T	K	S	L	R	D	Y	L	L	P	E	N	S	G	V	R	Q	A	F	Q	D	M
Template Known Secondary structure						S	S	S							S	S											T	T	S		S	S				S																		S			T					T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	S	Q	N	A	L	A	L	M	A	D	G	E	D	A	N	L	Q	S	Q	L	Y	T	A	K	Q	L	V	S	E	L	I	G	M	D	S	K	L	S	G	V	L	D	M	L	E	E	A	T	I	Q	I	A	E	A	S	D	E	L	R	H	Y	C	D	R	L	D	L	D	P	N	R	L	F	E	L	E	Q
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	A	L	R	E	S	A	E	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	I	L	R	K	T	I	Q	R	E	Q	N	R	I	L	Q	L	N	Q
Template Known Secondary structure										T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.																																																		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		304	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		R	I	S	K	Q	I	S	L	A	.	R	K	H	H	V	S	P	E	A	L	P	Q	Y	Y	Q	S	L	L	E	E	Q	Q	Q	L	D	D	Q	A	D	S	Q	E	T	L	A	L	A	V	T	K	H	H	Q	Q	A	L	E	I	A	R	A	L	H	Q	Q	R	Q	Q	Y	A	E	E	L	A	Q	L	I	T	D	S
Query Conservation											.
Alig confidence											.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	Q	N	I	A	F	G	Q	V	K	G	V	R	L	V	V	N	I	R	D	T	H	S	I	L	L	N	A	L	S	D	Q	H	E	Q	H	K	D	S	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	A	M	L
Template Known Secondary structure		T	S	S	S			B	T	T	B																				T	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1289	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330																																	.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.														.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	H	A	L	S	M	P	H	G	Q	F	T	I	D	V	K	F	D	E	H	H	L	G	A	D	G	A	D	R	I	E	F	R	V	T	T	N	P	G	Q	P	M	Q	P	I	A	K	V	A	S	G	G	E	L	S	R	I	A	L	A	I	Q	V	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		Y	K	R	I	N	P	H	.	.	.	.	.	.	I	Q	T	I	G	E	E	L	L	D	Y	R	N	Y	L	D	L	E	V	E	T	L	R	G	A	Y	G	W	M	R	A	E	S	S	A	L	S	T	G	E	A	I	G	T	G	M	S	I	L	L	M	V	V	Q	S	W	E	E	E	S	R	R	M	R	A	K	D
Template Known Secondary structure									.	.	.	.	.	.								T	T	S	S	G	G	G										S	S	S	S						G	G	G	S																					T	G	G	G	T	T	T	S		T	T
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		1344	.	.	.	.	.	1350							.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	E	T	P	A	L	I	F	D	E	V	D	V	G	I	S	G	P	T	A	A	V	V	G	K	L	L	R	Q	L	G	E	S	T	Q	V	M	C	V	T	H	L	P	Q	V	A	G	C	G	H	Q	H	Y	F	V	S	K	E	T	D	G	A	M	T	E	T	H	M	Q	S	L
Query Conservation
Alig confidence														.																			.	.											.
Template Conservation														.																			.	.											.
Template Sequence		I	L	P	C	R	L	L	F	L	D	Q	A	.	A	R	L	D	A	M	S	I	N	T	L	F	E	L	C	E	R	L	.	.	D	M	Q	L	L	I	A	A	P	E	.	N	I	S	P	E	R	G	T	T	Y	K	L	V	R	K	I	L	A	N	Q	E	Y	V	H	V	V	G	L
Template Known Secondary structure											S	S	G	.	G	G	S		S														.	.	T								S	S	.	S				S	S	S										S	S	S
Template Predicted Secondary structure														.																			.	.											.
Template SS confidence
		1425	.	.	.	.	1430	.	.	.	.	.	.		.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.			.	.	.	.	.	1460	.	.	.	.		.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.