Return to main results Retrieve Phyre Job Id

Job DescriptionP05824
Confidence96.12%DateThu Jan 5 10:58:56 GMT 2012
Rank285Aligned Residues23
% Identity26%Templatec3eihB_
PDB info PDB header:protein transportChain: B: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.......
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  TVITGETGAGKSIAIDALGLCLG
Query Conservation    
 
 








 

   

Alig confidence 






















Template Conservation 


 







 

 


  
 
Template Sequence  ILLYGPPGTGKSYLAKAVATEAN
Template Known Secondary structure 
STTS
TTT
Template Predicted Secondary structure 






Template SS confidence 






















   169170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions