Return to main results Retrieve Phyre Job Id

Job DescriptionP05824
Confidence99.65%DateThu Jan 5 10:58:56 GMT 2012
Rank33Aligned Residues74
% Identity22%Templatec3b5wE_
PDB info PDB header:membrane proteinChain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba
Resolution5.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   431........440.........450.........460.........470.........480.........490.........500........
Predicted Secondary structure 


























Query SS confidence 













































































Query Sequence  ASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE
Query Conservation 





 
  


 
 
        





   

      
   
  
    


 


   
    
    
   
Alig confidence 















....

























































Template Conservation 








 




 ....    
 



  
 

      
   
       


 


    
   
 
  
  
Template Sequence  LSGGQRQRIAIARALL. . . . RDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDG
Template Known Secondary structure  S
TT....S

S
TTSS

TTTTTSSS

SSGGGTTT
SSB

TT
Template Predicted Secondary structure 

....




















Template SS confidence 













































































   481........490...... ...500.........510.........520.........530.........540.........550....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions