Return to main results Retrieve Phyre Job Id

Job DescriptionP05824
Confidence96.36%DateThu Jan 5 10:58:56 GMT 2012
Rank219Aligned Residues26
% Identity23%Templatec2x8aA_
PDB info PDB header:nuclear proteinChain: A: PDB Molecule:nuclear valosin-containing protein-like; PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.......
Predicted Secondary structure 








Query SS confidence 

























Query Sequence  SGMTVITGETGAGKSIAIDALGLCLG
Query Conservation   

  
 
 








 

   

Alig confidence 

























Template Conservation     


 







 

 


    
Template Sequence  PAGVLLAGPPGCGKTLLAKAVANESG
Template Known Secondary structure 
SSSTTS
TT
Template Predicted Secondary structure 







Template SS confidence 

























   615....620.........630.........640
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions