Return to main results Retrieve Phyre Job Id

Job DescriptionP05824
Confidence99.72%DateThu Jan 5 10:58:56 GMT 2012
Rank24Aligned Residues82
% Identity18%Templatec2hydB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   428.430.........440.........450.........460.........470.........480.........490.........500.......
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  AKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSK
Query Conservation     





 
  


 
 
        





   

      
   
  
    


 


   
    
    
  
Alig confidence 


















....























































.
Template Conservation 
  








 




 ....    
 



  
 

      
   
       


 


        
 
  
 .
Template Sequence  GVKLSGGQKQRLSIARIFL. . . . NNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIE.
Template Known Secondary structure  GTTS
....

SSTTTT

TTTS
SSGGGTTT
S.
Template Predicted Secondary structure 




....


















.
Template SS confidence 















































































   475....480.........490... ......500.........510.........520.........530.........540.........
 
   508.510.......
Predicted Secondary structure 



Query SS confidence 









Query Sequence  ETDGAMTETH
Query Conservation            
Alig confidence  ...






Template Conservation  ... 
 
   
Template Sequence  . . . NGHIVET
Template Known Secondary structure  ...TT
Template Predicted Secondary structure  ...

Template SS confidence 









   550......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions