 |
Job Description | P05824 | Confidence | 99.53% | Date | Thu Jan 5 10:58:56 GMT 2012 |
Rank | 64 | Aligned Residues | 85 |
% Identity | 18% | Template | c2d2fA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:sufc protein; |
PDBTitle: crystal structure of atypical cytoplasmic abc-atpase sufc from thermus2 thermophilus hb8
|
Resolution | 1.90 Å |
|
 |
  |   |
425 | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | |
. | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | |
|
. | 500 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
Query Sequence |   |
Q | P | I | A | K | V | A | S | G | G | E | L | S | R | I | A | L | A | I | Q | V | I | T | A | R | K | M | E | T | P | A | L | I | F | D | E | V | D | V | G | I | S | G | P | T | A | A | V | V | G | K | L | L | R | Q | L | . |
G | E | S | T | Q | V | M | C | V | T | H | L | P | Q | V | A | G | C | . |
. |
G | H | Q |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
| . |   |   |   |   |
|
|
|   |
|
|
|   |   |   |
|   |   |   | . | . |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |
|   |   |   |
|
|   |
|
|
|
|
|   | . | . | . | . |   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
R | Y | L | N | E | G | F | S | G | G | E | K | K | R | N | E | I | L | Q | L | L | V | . |
. |
. |
. |
L | E | P | T | Y | A | V | L | D | E | T | D | S | G | L | D | I | D | A | L | K | V | V | A | R | G | V | N | A | M | R | G | P | N | F | G | A | L | V | I | T | H | Y | Q | R | I | L | N | Y | I | Q | P | D | K |
Template Known Secondary structure |   |
S | B | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
| S |  |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| B | T | T | B |  |  |  |  |  |  | S | S | S | G | G | G | G | T | S |
|
| S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
|
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |
  |   |
502 | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Y | F | V | S | K | E | T | D | G | A | M | T | E | T | H |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   | . | . | . | . |   |
|   |
|   |   |   |
Template Sequence |   |
V | H | V | M | M | . |
. |
. |
. |
D | G | R | V | V | A | T |
Template Known Secondary structure |   |
 |  |  |  |  | . | . | . | . | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
214 | . | . | . | . | |
|
|
|
. | 220 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|