Job Description P05824 Confidence 99.83% Date Thu Jan 5 10:58:56 GMT 2012 Rank 14 Aligned Residues 168 % Identity 14% Template c1ii8B_ PDB info PDB header:replication Chain: B: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain Resolution 3.02 Å

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		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	Q	A	D	S	Q	E	T	L	A	L	A	V	T	K	H	H	Q	Q	A	L	E	I	A	R	A	L	H	Q	Q	R	Q	Q	Y	A	E	E	L	A	Q	L	I	T	D	S	M	H	A	L	S	M	P	H	G	Q	F	T	I	D	V	K	F	D	E	H	H	L	G	A	D	G	A	D	R	I	E	F	R	V
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	V	K	K	E	I	K	D	L	E	K	A	K	D	F	T	E	E	L	I	E	K	V	K	K	Y	K	A	L	A	R	E	A	A	L	S	K	I	G	E	L	A	S	E	I	F	A	E	F	T	E	G	K	Y	S	E	V	V	V	R	A	E	E	N	K	.	.	.	.	.	.	.	.	.	.	.	.	V	R
Template Known Secondary structure																																																					T	T	S										T	T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.													.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450			.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																																				.	.																															.
Query SS confidence																																				.	.																															.
Query Sequence		T	T	N	P	G	Q	P	M	Q	P	I	A	K	V	A	S	G	G	E	L	S	R	I	A	L	A	I	Q	V	I	T	A	R	K	.	.	M	E	T	P	A	L	I	F	D	E	V	D	V	G	I	S	G	P	T	A	A	V	V	G	K	L	L	R	Q	L	.	G	E	S	T	Q	V	M	C	V	T	H	L	P
Query Conservation																																				.	.																															.
Alig confidence																																				.	.																															.
Template Conservation
Template Sequence		L	F	V	V	W	E	G	K	E	R	P	L	T	F	L	S	G	G	E	R	I	A	L	G	L	A	F	R	L	A	M	S	L	Y	L	A	G	E	I	S	L	L	I	L	D	E	P	T	P	Y	L	D	E	E	R	R	R	K	L	I	T	I	M	E	R	Y	L	K	K	I	P	Q	V	I	L	V	S	H	D	E
Template Known Secondary structure						B	T	T	B				G	G	G	S																						S	S		S								S	S	S	S		S													T	G	G	G	S	S							S		G
Template Predicted Secondary structure
Template SS confidence
		778	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	G	C	G	H	Q	H	Y	F	V	S	K	E	T	D	G	A	M	T	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	K	D	A	A	D	H	V	I	R	I	S	L	E	N	G	S	S	K	V	E	V
Template Known Secondary structure		G	G	G	G	T	S	S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		858	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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