Job Description P05824 Confidence 99.80% Date Thu Jan 5 10:58:56 GMT 2012 Rank 17 Aligned Residues 183 % Identity 15% Template c1ii8A_ PDB info PDB header:replication Chain: A: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain Resolution 3.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		L	A	Q	L	T	I	S	N	F	A	I	V	R	E	L	E	I	D	F	H	S	G	M	T	V	I	T	G	E	T	G	A	G	K	S	I	A	I	D	A	L	G	L	C	L	G	G	R	A	E	.	.	.	.	.	.	A	D	M	V	R	T	G	A	A	R	A	D	L	C	A	R	F	S	L	K	D	T	P	A
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	R	V	T	V	K	N	F	R	S	H	S	D	T	V	V	E	F	K	E	G	I	N	L	I	I	G	Q	N	G	S	G	K	S	S	L	L	D	A	I	L	V	G	L	Y	W	P	L	R	I	K	D	I	K	K	D	E	F	T	K	V	G	A	R	D	T	Y	I	D	L	I	F	E	K	D	G	T	K	Y
Template Known Secondary structure									S	S	S	S		S	S							S	S								T	T	S	S														T	T	S			T	T			T					T	S		S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		A	L	R	W	L	E	E	N	Q	L	E	D	G	H	E	C	L	L	R	R	V	I	S	S	D	G	R	S	R	G	F	I	N	G	T	A	V	P	L	S	Q	L	R	E	.	.	.	.	L	G	Q	L	L	I	Q	I	H	G	Q	H	A	H	Q	L	L	T	K	P	E	H	Q	K	F	L	L	D	G	Y	A	N
Query Conservation																																														.	.	.	.
Alig confidence																																														.	.	.	.
Template Conservation
Template Sequence		R	I	T	R	R	F	L	K	G	Y	S	S	G	E	I	H	A	M	K	R	L	V	G	N	E	W	K	H	V	T	E	P	S	S	K	A	I	S	A	F	M	E	K	L	I	P	Y	N	I	F	L	N	A	I	Y	I	R	Q	G	Q	I	D	A	I	L	E	S	D	E	A	R	E	K	V	V	R	E	V	L	N
Template Known Secondary structure										T	T	S												T	T					S	S		S	S												S						T	T	T	T				T	T	T	T	G	G	G	S	S		S											T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	S	L	L	Q	E	M	T	A	R	Y	Q	L	W	H	Q	S	C	R	D	L	A	H	H	Q	Q	L	S	Q	E	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	K	F	E	T	A	Y	K	K	L	S	E	L	K	K	T	I	N	N	R	I	K	E	Y	R	D	I	L	A	R	T	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions