Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7D1
Confidence100.00%DateThu Jan 5 11:05:23 GMT 2012
Rank3Aligned Residues185
% Identity56%Templatec3v2iA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: structure of a peptidyl-trna hydrolase (pth) from burkholderia2 thailandensis
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  IKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFF
Query Conservation 










  
  






  

 

                          
 
 

 



 

  
       
Alig confidence 















































































Template Conservation 










  
  





   

 

                          
 
 

 



 

  
       
Template Sequence  IKLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLEPQTYMNRSGQSVVALAHFF
Template Known Secondary structure 





SGGGTTSGGGT


GGGTTT
S
GGG
Template Predicted Secondary structure 





























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   83......90.........100.........110.........120.........130.........140.... .....150.........160.
Predicted Secondary structure 































.





Query SS confidence 





























































.
















Query Sequence  RINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKN. KVVGFVLGKPPVSEQKL
Query Conservation   
    









  
 



 


  







   

    
 








    . 
  


  
   
   
Alig confidence 












































.















.
















Template Conservation   
    









  
 



  

  







   


 . 
 








      
  


  
   
   
Template Sequence  KILPNEILVAHDELDLPPGAVKLKLGGGSGGHNGLKDISAHLSSQ. QYWRLRIGIGHPRDMIPDVANFVLKPPRKEEQDV
Template Known Secondary structure  T

GGGTTS
TT




TT
T

.
S


TTTT


TTS


Template Predicted Secondary structure 



















.















Template SS confidence 















































































   82.......90.........100.........110.........120...... ...130.........140.........150.........160
 
   162.......170.........180........
Predicted Secondary structure 

Query SS confidence 


























Query Sequence  IDEAIDEAARCTEMWFTDGLTKATNRL
Query Conservation 
              
        
  
Alig confidence 


























Template Conservation 
      
   
          


 
Template Sequence  IDAAIERALAVMPAVVKGETERAMMQL
Template Known Secondary structure  TT

Template Predicted Secondary structure 



Template SS confidence 


























   170.........180.........190......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions