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Job DescriptionP76198
Confidence7.96%DateThu Jan 5 12:20:25 GMT 2012
Rank11Aligned Residues217
% Identity14%Templatec3hd6A_
PDB info PDB header:membrane protein, transport proteinChain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  VTNELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYAMAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMV
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Template Sequence  YRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDS. . . . QHRAAINTYCSLAACVLTSVAISSALHKKG
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TTGGGGTTTSS

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   200.........210.........220.........230.........240..... ....250.........260.........270.....
 
   278.280.........290..... ....300.........310.........320.........330.........340.........350.....
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Query Sequence  RPIWANVFNSALATITAA. . IIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVI
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Template Sequence  KLDMVHIQNATLAGGVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVG
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GGGTTTTTTT
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   276...280.........290.........300.........310.........320.........330.........340.........350.....
 
   356...360 .........370.........380.........390.........400.........410........
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Query Sequence  PLITG. . YLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGERKFCTRLNTIK
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Template Sequence  AVTAASDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSDENCFEDAVYWEMPEGN
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   356...360.........370.........380.........390.........400.........410.........420
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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