Return to main results Retrieve Phyre Job Id

Job DescriptionP30852
Confidence85.27%DateThu Jan 5 11:46:33 GMT 2012
Rank189Aligned Residues45
% Identity24%Templated1ylfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   314.....320.........330.........340.........350.........
Predicted Secondary structure 













Query SS confidence 













































Query Sequence  LANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYV
Query Conservation 
  
      



     
    
   
  


 
 
   

 
 
Alig confidence 







































.




Template Conservation 

       

  

    
    
 


  
   


 
. 

  
Template Sequence  LKNNPSSLCTSDYXAESVNTNPVVIRKIXSYLKQAGFVYV. NGGAG
Template Known Secondary structure  S
GGG

TS
TTS.


Template Predicted Secondary structure 













.




Template SS confidence 













































   20.........30.........40.........50......... 60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions