Return to main results Retrieve Phyre Job Id

Job DescriptionP30852
Confidence78.27%DateThu Jan 5 11:46:33 GMT 2012
Rank232Aligned Residues58
% Identity12%Templated1xmaa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   310.........320.........330. ........340.........350.........360.......
Predicted Secondary structure 





........











Query SS confidence 





















. . . . . . . .



































Query Sequence  FPELLANVGDEVTPVDVVAERA. . . . . . . . GQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHV
Query Conservation     

  
      



    ........ 
    
   
  


 
 
   

 
 
 
     
Alig confidence 





















........



































Template Conservation     

  
      



   
         

 
 

  
  

  
 
          
  
 
Template Sequence  DTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGEETKRRTYYRI
Template Known Secondary structure 

TTS



TTS

Template Predicted Secondary structure 






















Template SS confidence 

































































   12.......20.........30.........40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions