Return to main results Retrieve Phyre Job Id

Job DescriptionP30852
Confidence91.46%DateThu Jan 5 11:46:33 GMT 2012
Rank125Aligned Residues52
% Identity15%Templated1p4xa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   305....310....... ..320.........330.........340.........350......
Predicted Secondary structure 


...












Query SS confidence 












. . .






































Query Sequence  DVALPFPELLANV. . . GDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPG
Query Conservation   
      

  
...      



     
    
   
  


 
 
   

Alig confidence 












...






































Template Conservation   

  
  

  
        
  


  
      

  
  

  
 
 
   
Template Sequence  DMTIKEFILLTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRS
Template Known Secondary structure  SS
S
S
SSSS
GGGTTTS

Template Predicted Secondary structure 


















Template SS confidence 






















































   31........40.........50.........60.........70.........80.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions