Return to main results Retrieve Phyre Job Id

Job DescriptionP30852
Confidence84.28%DateThu Jan 5 11:46:33 GMT 2012
Rank196Aligned Residues40
% Identity18%Templated1hw1a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain GntR-like transcriptional regulators
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   323......330.........340.........350.........360..
Predicted Secondary structure 








Query SS confidence 







































Query Sequence  PVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR
Query Conservation   



     
    
   
  


 
 
   

 
 
 
Alig confidence 







































Template Conservation 
   

    

  


 

  
   
 
    
 
  
 
Template Sequence  AERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVN
Template Known Secondary structure 
T

TTSTT
Template Predicted Secondary structure 










Template SS confidence 







































   33......40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions