 |
Job Description | P30852 | Confidence | 93.97% | Date | Thu Jan 5 11:46:33 GMT 2012 |
Rank | 65 | Aligned Residues | 52 |
% Identity | 15% | Template | c3nqoB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:marr-family transcriptional regulator; |
PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
|
Resolution | 2.20 Å |
|
  |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | |
|
|
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | A | L | P | F | P | E | L | L | A | N | V | G | D | . |
. |
. |
E | V | T | P | V | D | V | V | A | E | R | A | G | Q | P | V | P | E | V | V | T | Q | L | L | E | L | E | L | A | G | W | I | A | A | V | P | G |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|
|   |   |
|   |   | . | . | . |   |   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |
|   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |
Template Sequence |   |
I | L | T | S | R | Q | Y | X | T | I | L | S | I | L | H | L | P | E | E | E | T | T | L | N | N | I | A | R | K | X | G | T | S | K | Q | N | I | N | R | L | V | A | N | L | E | K | N | G | Y | V | D | V | I | P | S |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | S |
| G | G | G |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|