 |
Job Description | P30852 | Confidence | 56.55% | Date | Thu Jan 5 11:46:33 GMT 2012 |
Rank | 292 | Aligned Residues | 48 |
% Identity | 15% | Template | c3h0dB_ |
PDB info |
PDB header:transcription/dna | Chain: B: PDB Molecule:ctsr; |
PDBTitle: crystal structure of ctsr in complex with a 26bp dna duplex
|
Resolution | 2.40 Å |
|
  |   |
326 | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | |
|
. | . | . | . | . | 350 | . | |
|
|
. | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|  |  | . | . | . |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | A | E | R | A | G | Q | P | V | P | E | V | V | T | Q | L | L | E | . |
. |
L | E | L | A | G | W | I | . |
. |
. |
A | A | V | P | G | G | Y | V | R | L | R | R | A | C | H | V | R | R | T | N | V | F |
Query Conservation |   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   | . | . |
|
|
|   |
|   |
| . | . | . |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | I | A | N | K | F | R | C | V | P | S | Q | I | N | Y | V | I | N | T | R | F | T | L | E | R | G | Y | I | V | E | S | K | R | G | G | G | G | Y | I | R | I | X | K | V | K | T | K | S | E | A | Q | L | I |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S |
| T |  |  |  |  |  |  |  |  |  |  | S |
| T | T | T | T |  |  |  |  |  |  |
| S | T | T |
|  |  |  |  |  |  |
|
|
| S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|