 |
Job Description | P30852 | Confidence | 77.94% | Date | Thu Jan 5 11:46:33 GMT 2012 |
Rank | 235 | Aligned Residues | 53 |
% Identity | 23% | Template | c3eyyA_ |
PDB info |
PDB header:transport | Chain: A: PDB Molecule:putative iron uptake regulatory protein; |
PDBTitle: structural basis for the specialization of nur, a nickel-2 specific fur homologue, in metal sensing and dna3 recognition
|
Resolution | 2.40 Å |
|
 |
  |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | |
. | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | A | L | P | F | P | E | L | L | A | N | V | . |
G | D | E | V | T | P | V | D | V | V | A | E | R | A | . |
. |
. |
. |
. |
G | Q | P | V | P | E | V | V | T | Q | L | L | E | L | E | L | A | G | W | I | A | A | V | P | G | G |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|
|   |   |
| . |   |   |   |   |   |   |
|
|
|
|   |   |   |   | . | . | . | . | . |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
Template Sequence |   |
R | L | T | P | Q | R | Q | L | V | L | E | A | V | D | T | L | E | H | A | T | P | D | D | I | L | G | E | V | R | K | T | A | S | G | I | N | I | S | T | V | Y | R | T | L | E | L | L | E | E | L | G | L | V | S | H | A | H | L | G |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | B |
|  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |
| G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|