Job Description P30852 Confidence 86.57% Date Thu Jan 5 11:46:33 GMT 2012 Rank 181 Aligned Residues 77 % Identity 6% Template c3cuqA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.61 Å

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																					.
Query SS confidence																													.	.	.	.	.																					.
Query Sequence		E	P	E	E	I	L	E	N	L	Q	F	G	L	H	W	L	P	D	A	P	E	N	S	F	Y	S	P	.	.	.	.	.	D	Q	Q	D	V	A	L	P	F	P	E	L	L	A	N	V	G	D	E	V	.	T	P	V	D	V	V	A	E	R	A	G	Q	P	V	P	E	V	V	T	Q	L	L	E	L	E	L	A
Query Conservation																													.	.	.	.	.																					.
Alig confidence																													.	.	.	.	.																					.
Template Conservation
Template Sequence		S	Q	D	D	L	I	R	A	I	K	K	L	K	A	L	G	T	G	F	G	I	I	P	V	G	G	T	Y	L	I	Q	S	V	P	A	E	L	N	M	D	H	T	V	V	L	Q	L	A	E	K	N	G	Y	V	T	V	S	E	I	K	A	S	L	K	W	E	T	E	R	A	R	Q	V	L	E	H	L	L	K	E
Template Known Secondary structure														G	G	G	S	T	T							T	T							S																T	T	T	S												T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		349	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	A
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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