Job Description P30852 Confidence 82.18% Date Thu Jan 5 11:46:33 GMT 2012 Rank 211 Aligned Residues 81 % Identity 16% Template c2zmeB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein-sorting-associated protein 36; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.90 Å

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		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																		.
Query SS confidence																															.	.	.	.	.	.																		.
Query Sequence		V	T	E	P	E	E	I	L	E	N	L	Q	F	G	L	H	W	L	P	D	A	P	E	N	S	F	Y	S	P	.	.	.	.	.	.	D	Q	Q	D	V	A	L	P	F	P	E	L	L	A	N	V	G	.	D	E	V	T	P	V	D	V	V	A	E	R	A	G	Q	P	V	P	E	V	V	T	Q	L	L	E	L
Query Conservation																															.	.	.	.	.	.																		.
Alig confidence																															.	.	.	.	.	.																		.
Template Conservation
Template Sequence		L	L	S	P	E	D	L	V	N	A	C	K	M	L	E	A	L	K	L	P	L	R	L	R	V	F	D	S	G	V	M	V	I	E	L	Q	S	H	K	E	E	E	M	V	A	S	A	L	E	T	V	S	E	K	G	S	L	T	S	E	E	F	A	K	L	V	G	M	S	V	L	L	A	K	E	R	L	L	L	A
Template Known Secondary structure														T	T	G	G	G	T		S							T	T								S	S																		S		B										T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		346	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	G	W	I	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	M	G	H	L	C	R
Template Known Secondary structure					T	S
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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