Job Description P30852 Confidence 80.32% Date Thu Jan 5 11:46:33 GMT 2012 Rank 222 Aligned Residues 73 % Identity 10% Template c1v9pB_ PDB info PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																											.	.	.	.														.
Query SS confidence																																											.	.	.	.														.
Query Sequence		V	D	T	E	I	W	L	R	L	M	S	I	S	S	L	Y	G	D	D	M	V	R	I	A	H	W	V	A	K	Q	S	H	I	D	A	V	V	L	Q	Q	T	.	.	.	.	G	L	T	L	R	Q	A	Q	R	F	L	S	F	.	P	R	K	S	I	E	S	S	L	C	W	L	E	Q	P	N	H	H	L
Query Conservation																																											.	.	.	.														.
Alig confidence																																											.	.	.	.														.
Template Conservation
Template Sequence		R	G	L	E	R	L	L	Y	A	L	G	L	P	G	V	G	E	V	L	A	R	N	L	A	R	R	F	G	T	M	D	R	L	L	E	A	S	L	E	E	L	L	E	V	E	E	V	G	E	L	T	A	R	A	I	L	E	T	L	K	D	P	A	F	R	D	L	V	R	R	L	K	E	A	G	V	S	M
Template Known Secondary structure		S										T		T	T															B					T	T								T	S	T	T														T														T	T
Template Predicted Secondary structure
Template SS confidence
		2504	.	.	.	.	.	2510	.	.	.	.	.	.	.	.	.	2520	.	.	.	.	.	.	.	.	.	2530	.	.	.	.	.	.	.	.	.	2540	.	.	.	.	.	.	.	.	.	2550	.	.	.	.	.	.	.	.	.	2560	.	.	.	.	.	.	.	.	.	2570	.	.	.	.	.	.	.	.	.	2580	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions