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Job Description | P30852 | Confidence | 69.06% | Date | Thu Jan 5 11:46:33 GMT 2012 |
Rank | 260 | Aligned Residues | 79 |
% Identity | 11% | Template | c1u5tB_ |
PDB info |
PDB header:transport protein | Chain: B: PDB Molecule:defective in vacuolar protein sorting; vps36p; |
PDBTitle: structure of the escrt-ii endosomal trafficking complex
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Resolution | 3.60 Å |
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275 | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | |
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Query Sequence |   |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | P | M | E | M | R | E | A | C | E | R | F | E | H | L | G | L | N | E | L | K | L | V | K | V | N | K | R | I | L | C | V | T | S | E | K | F | D | V | V | K | E | K | L | V | D | L | I | G | D | N | P | G | S | D | L | L | R | L | T | Q | I | L | S | S | N | N | S | K | S | N | W | T | L | G | I | L | M | E | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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456 | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . |
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342 | . | . | . | . | . | . | . | 350 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | L | E | L | E | L | A | G | W | I | A | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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536 | . | . | . | 540 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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