Job Description P30852 Confidence 77.17% Date Thu Jan 5 11:46:33 GMT 2012 Rank 238 Aligned Residues 77 % Identity 8% Template c1u5tA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																									.
Query SS confidence																						.	.	.	.																									.
Query Sequence		E	P	E	E	I	L	E	N	L	Q	F	G	L	H	W	L	P	D	A	P	.	.	.	.	E	N	S	F	Y	S	P	D	Q	Q	D	V	A	L	P	F	P	E	L	L	A	N	V	G	.	D	E	V	T	P	V	D	V	V	A	E	R	A	G	Q	P	V	P	E	V	V	T	Q	L	L	E	L	E	L	A	G
Query Conservation																						.	.	.	.																									.
Alig confidence																						.	.	.	.																									.
Template Conservation
Template Sequence		G	L	D	D	L	E	K	S	I	D	M	L	K	S	L	E	C	F	E	I	F	Q	I	R	G	K	K	F	L	R	S	V	P	N	E	L	T	S	D	Q	T	K	I	L	E	I	C	S	I	L	G	Y	S	S	I	S	L	L	K	A	N	L	G	W	E	A	V	R	S	K	S	A	L	D	E	M	V	A	N	G
Template Known Secondary structure														T	T	T									T	T							S	S	S				T	T							T	T	T	T	T	S			B												S													T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions