Job Description P30852 Confidence 99.86% Date Thu Jan 5 11:46:33 GMT 2012 Rank 5 Aligned Residues 150 % Identity 17% Template c1rcuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein vt76; PDBTitle: x-ray structure of tm1055 northeast structural genomics2 consortium target vt76 Resolution 2.50 Å

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		110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		L	A	V	V	G	S	R	A	.	.	H	S	W	Y	G	E	R	W	G	R	L	F	C	E	T	L	A	T	R	G	V	T	I	T	S	G	L	A	R	G	I	D	G	V	A	H	K	A	A	L	Q	V	N	G	V	S	I	A	V	L	G	N	G	L	N	T	I	H	P	R	R	H	A	R	L	A	A	S	L	L
Query Conservation										.	.
Alig confidence										.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	Y	S	G	P	V	N	K	S	P	V	S	E	L	R	D	I	C	L	E	L	G	R	T	L	A	K	K	G	Y	L	V	F	N	G	G	R	D	G	V	X	E	L	V	S	Q	G	V	R	E	A	G	G	T	V	V	G	I	L	P	D	E	E	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S		T	T	S	T	T	T	G	G	G														T	T								S	S	T												T	T								S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	G	G	A	L	V	S	E	F	P	L	D	V	P	P	L	A	Y	N	F	P	R	R	N	R	I	I	S	G	L	S	K	G	V	L	V	V	E	A	A	L	R	S	G	S	L	V	T	A	R	C	A	L	E	Q	G	R	E	V	F	A	L	P	G	P	I	G	N	P	G	S	E	G	P	H	W	L	I	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																			.	.																										.
Template Conservation		.	.	.	.	.	.	.																																			.	.																										.
Template Sequence		.	.	.	.	.	.	.	N	P	Y	L	S	V	A	V	K	T	G	L	D	F	Q	X	R	S	F	V	L	L	R	N	A	D	V	V	V	S	I	G	G	E	.	.	I	G	T	A	I	E	I	L	G	A	Y	A	L	G	K	P	V	I	L	L	R	G	T	G	G	.	W	T	D	R	I	S	Q	V	L	I	D
Template Known Secondary structure		.	.	.	.	.	.	.		T	T		S						S												T	T		S						S			.	.														T							T	T	S			.					G	G	G	G		B	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																			.	.																										.
Template SS confidence
									73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.
		268	.	270										.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	A	.	.	.	.	.	.	.	.	.	I	L	V	T	E	P	E	E	I	L	E	N	L
Query Conservation					.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	Y	L	D	N	R	R	I	V	E	I	H	Q	A	W	T	V	E	E	A	V	Q	I	I
Template Known Secondary structure		T	T	B	S	S	T	T			S						S	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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