Job Description P77713 Confidence 30.53% Date Wed Jan 25 15:21:12 GMT 2012 Rank 83 Aligned Residues 226 % Identity 15% Template d3sila_ SCOP info 6-bladed beta-propeller Sialidases Sialidases (neuraminidases) Resolution 1.05

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		15	.	.	.	.	20		.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.
Predicted Secondary structure								.									.	.	.	.	.	.																	.																																					.	.
Query SS confidence								.									.	.	.	.	.	.																	.																																					.	.
Query Sequence		P	S	L	C	R	Q	.	G	E	D	Y	Y	I	A	T	.	.	.	.	.	.	S	T	F	E	W	F	P	G	V	R	I	Y	H	S	R	D	.	L	K	N	W	S	L	V	S	T	P	L	D	R	V	S	M	L	D	M	K	G	N	P	D	S	G	G	I	W	A	P	C	L	S	Y	A	.	.	D	G	K	F
Query Conservation								.									.	.	.	.	.	.																	.																																					.	.
Alig confidence								.									.	.	.	.	.	.																	.																.	.	.	.	.	.																.	.
Template Conservation																																																							.	.	.	.	.	.
Template Sequence		P	A	M	C	T	T	S	K	G	T	I	V	V	F	A	D	A	R	H	N	T	A	S	D	Q	S	F	I	D	T	A	A	A	R	S	T	D	G	G	K	T	W	N	K	K	I	A	I	Y	N	D	R	V	.	.	.	.	.	.	N	S	K	L	S	R	V	M	D	P	T	C	I	V	A	N	I	Q	G	R	E
Template Known Secondary structure								T	T											S	S		S		S	S	S										S	S	S	S	S													S	.	.	.	.	.	.		T	T	T														T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		85	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.													.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	L	Y	T	.	.	.	.	.	.	.	.	.	.	.	D	V	K	I	V	D	S	P	W	K	N	G	R	N	F	L	V	T	A	P	S	I	E	G	P	W	S	E	P	I	P	M	G	N	G	G	F	D	.	.	.	.	.	.	.	.	.	.	.	.	P	S	L	F	H	D	D	D	G	R	K	Y	Y	I
Query Conservation							.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	L	V	M	V	G	K	W	N	N	N	D	K	T	W	G	A	Y	R	D	K	A	P	D	T	D	W	D	L	V	L	Y	K	S	T	D	D	G	V	T	F	S	K	V	E	T	N	I	H	D	I	V	T	K	N	G	T	I	S	A	M	L	G	G	V	G	S	G	L	Q	L	N	D	G	K	L	V	F	P
Template Known Secondary structure											S	S			S		G	G	G			S	S	S	S		T	T									S	S	T	T	S								S										S								S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	P	W	G	P	R	H	H	S	N	P	H	N	T	I	V	L	Q	A	F	D	P	Q	T	G	T	L	S	P	E	R	K	T	L	F	T	G	T	P	L	C	Y	T	E	G	A	H	L	Y	R	H	A	G	W	Y	Y	L	M	A	A	E	G	G	T	S	Y	E	H	A	V	V	V	L	R	S	K	N	I	D
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		V	Q	M	V	R	T	K	N	I	T	T	V	L	N	T	S	F	I	Y	S	T	D	G	I	T	W	S	L	P	S	G	Y	C	E	G	F	G	.	.	.	.	.	.	.	S	E	N	N	I	I	E	F	N	A	S	L	V	N	N	I	.	.	.	.	.	R	N	S	G	L	R	R	S	F	E	T	K	D	F	G
Template Known Secondary structure								T	T	S	S		S									S	S	S	S	S					S						T	T	.	.	.	.	.	.	.									T	T							.	.	.	.	.			S	S	B		B					S	S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.								230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		222	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		G	P	Y	E	L	.	H	P	D	V	T	M	M	T	S	W	H	L	P	E	N	P	L	Q	K	S	G	H	G	S	L	L	Q	T	H	T	G	E	W	Y	M	A	Y	L	T
Query Conservation							.
Alig confidence							.										.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		K	T	W	T	E	F	P	P	M	D	K	K	V	D	N	.	.	.	.	.	.	.	R	N	H	G	V	Q	G	S	T	I	T	I	P	S	G	N	K	L	V	A	A	H	S
Template Known Secondary structure		S						T	T	T	T	T		S	B		.	.	.	.	.	.	.		T	T												T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.								.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions