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Job DescriptionP77713
Confidence99.54%DateWed Jan 25 15:21:12 GMT 2012
Rank40Aligned Residues187
% Identity18%Templated1y4wa2
SCOP info5-bladed beta-propeller Arabinanase/levansucrase/invertase Glycosyl hydrolases family 32 N-terminal domain
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GFNPDPS. LCRQGEDYYIATSTFEWFPGVRI. . . . . . . . YHSRDLKNWSLVSTPLDRVSMLDMKGNPDSGGIWAPCLSYA
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Template Sequence  NWMNDPNGLLYHNGTYHLF. . . FQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVT. . . . EMYFSGSAVAD
Template Known Secondary structure  TT...
TT
SSS
S
SSSSS


BTTTS


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   37..40.........50..... ....60.........70.........80.........90........ .100.........
 
   81. .......90.........100 .........110......... 120.......
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Query Sequence  DG. . . . . . . . . . . KFWLLYTDVKIVDSPWKN. . . . . . . . GRNFLVTAPSIEGPWSEPI. . . . . . . . . . . . . . PMGNGGFD
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Template Sequence  VNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRD
Template Known Secondary structure  TT
TTS


SSS

SS

TTS

TTSSTTSS

TTT

SB
S

TT
GGGTTS
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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   128.130.........140.........150.........160.........170.........180.........190... ......200.
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Query Sequence  PSLFHDDDGRKYYIYRPWGPRHHSNPHNTIVLQAFDPQTGTLSPERKTLFTGTPLCYTEGAHLYRH. . . . . . AGWYYLMA
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Template Sequence  PFVFWHDESQKWVVVTSIAELH. . . . . KLAIYTSDNLKDWKLVSEFGP. . YNAQGGVWECPGLVKLPLDSGNSTKWVITS
Template Known Secondary structure  TTTTGGGT.....SSSSS


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   190.........200.........210. ........220.........230.. .......240.........250.........260..
 
   202.......210
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Query Sequence  AEGGTSYEH
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Template Sequence  GLNPGGPPG
Template Known Secondary structure  S

STT
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   263......270.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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