Job Description P77713 Confidence 99.44% Date Wed Jan 25 15:21:12 GMT 2012 Rank 41 Aligned Residues 253 % Identity 16% Template c3tawA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hypothetical glycoside hydrolase; PDBTitle: crystal structure of a hypothetical glycoside hydrolase (bdi_3141)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution Resolution 1.70 Å

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		5	.	.	.	.	10	.	.	.	.																							.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		N	P	I	L	T	G	F	N	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	L	C	R	Q	G	E	D	Y	Y	I	A	T	S	T	F	E	W	.	.	.	.	.	.	.	.	F	P	G	V	R	I	Y	H	S	R	D	L	K	N	W	S	L	V	S	T	P
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence							.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation							.	.	.
Template Sequence		N	P	V	I	K	.	.	.	P	L	P	T	K	F	Y	C	P	X	R	E	D	S	V	A	W	E	E	S	D	T	F	N	P	A	A	T	I	Y	D	G	K	I	V	V	X	Y	R	A	E	D	N	S	A	Q	G	I	G	S	R	T	S	R	L	G	Y	A	T	S	T	D	G	I	H	F	E	R	D	T	K	P
Template Known Secondary structure				S	B		.	.	.									T	T	T	T					T	T	S	S											T	T											S	S	S		S	T	T	S	S										S	S	S	S	S					S	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		54	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																												.																																													.	.	.	.	.	.	.	.	.
Query SS confidence																												.																																													.	.	.	.	.	.	.	.	.
Query Sequence		L	D	R	V	S	M	L	D	M	K	G	N	P	D	S	G	G	I	W	A	P	C	L	S	Y	A	.	D	G	K	F	W	L	L	Y	T	D	V	K	I	V	D	S	P	W	K	N	G	R	N	F	L	V	T	A	P	S	I	E	G	P	W	S	E	P	I	P	M	G	N	G	.	.	.	.	.	.	.	.	.
Query Conservation																												.																																													.	.	.	.	.	.	.	.	.
Alig confidence																												.														.	.	.	.	.																.											.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.																.
Template Sequence		A	F	Y	P	A	K	D	N	Q	A	E	N	E	C	P	G	G	T	E	D	P	R	I	A	X	T	E	D	G	T	Y	V	L	L	Y	T	Q	W	N	R	.	.	.	.	.	K	V	P	R	L	A	V	A	T	S	K	D	L	K	H	.	W	T	K	F	G	P	A	F	E	K	A	Y	N	G	K	F	K	D	E
Template Known Secondary structure		S	B				S	S	T	T					T	T	T											T	T	S											S	.	.	.	.	.	S										S	S	S	S	S	.							T	T	S	S					T	T	T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.																.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
			125	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.								.																																								.	.	.	.															.	.	.	.	.
Query SS confidence		.								.																																								.	.	.	.															.	.	.	.	.
Query Sequence		.	G	F	D	P	S	L	F	.	H	D	D	D	G	R	K	Y	Y	I	Y	R	P	W	G	P	R	H	H	S	N	P	H	N	T	I	V	L	Q	A	F	D	P	Q	T	G	T	L	S	.	.	.	.	P	E	R	K	T	L	F	T	G	T	P	L	C	Y	.	.	.	.	.	T	E	G	A	H	L	Y	R	H
Query Conservation		.								.																																								.	.	.	.															.	.	.	.	.
Alig confidence		.								.																																								.	.	.	.															.	.	.	.	.
Template Conservation
Template Sequence		A	T	K	S	A	S	L	V	T	T	L	K	G	D	K	Q	V	I	A	K	V	N	G	K	Y	F	X	Y	W	G	E	K	N	V	Y	A	A	T	S	D	N	L	I	D	W	D	P	L	L	D	E	N	G	E	L	L	K	L	F	S	P	R	S	G	Y	F	D	S	Q	L	T	E	C	G	P	P	A	I	L	T
Template Known Secondary structure														T	T							B	T	T	B							S	S	S	B						S	S	S	S	S					B		T	T	S	S	B			S	B				T	T	S	S		S	S						S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.											.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																				.	.													.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.																				.	.													.	.	.
Query Sequence		A	G	W	Y	Y	L	M	A	A	E	G	G	.	.	.	.	.	.	.	.	.	.	T	S	Y	E	H	A	V	V	V	L	R	S	K	N	I	D	G	P	Y	.	.	E	L	H	P	D	V	T	M	M	T	S	W	.	.	.	H	L	P	E	N	P	L	Q	K	S	G	H	G	S	L	L	Q	T	H	T	G	E
Query Conservation														.	.	.	.	.	.	.	.	.	.																				.	.													.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.													.							.	.													.	.	.
Template Conservation																																				.
Template Sequence		K	D	G	I	V	L	L	Y	N	G	K	N	E	P	G	E	K	G	D	T	A	Y	P	A	N	S	Y	C	A	G	Q	A	L	F	.	D	V	N	N	P	T	K	L	I	G	R	L	D	K	P	F	L	Q	P	T	D	D	F	E	K	S	G	Q	Y	P	A	G	T	V	F	V	E	G	L	V	Y	Y	R	N	K
Template Known Secondary structure		T	T												S	G	G	G	S		T	T	S		T	T										.		S	S	S	T	T							S	S		S	B				S					S	S	S	S	T	T		B										T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		259	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Y	M	A	Y	L	T	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	Y	L	Y	Y	G	C	A	D
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions