Job Description P77713 Confidence 99.32% Date Wed Jan 25 15:21:12 GMT 2012 Rank 44 Aligned Residues 256 % Identity 15% Template c3r67A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative glycosidase; PDBTitle: crystal structure of a putative glycosidase (bt_4094) from bacteroides2 thetaiotaomicron vpi-5482 at 2.30 a resolution Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.																					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		N	P	I	L	T	G	F	N	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	L	C	R	Q	G	E	D	Y	Y	I	A	T	S	T	F	.	.	.	.	.	.	.	.	E	W	F	P	G	V	R	I	Y	H	S	R	D	L	K	N	W	S	L	V	S	T	P	L	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	I	V	S	P	D	T	T	T	V	F	Y	C	P	X	R	Q	D	S	V	A	W	E	S	S	D	T	F	N	P	A	A	T	I	Y	D	G	K	V	V	V	L	Y	R	A	E	D	N	S	A	V	G	I	G	S	R	T	S	R	L	G	Y	A	Y	S	D	D	G	L	H	F	N	R	X	T	V	P	V	F
Template Known Secondary structure				S	B				S	S						T	T	T	T					T	T	S	S											T	T												S	S	S	T	T	S												S	S	S	S	S					S	S		S	B
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.											.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	S	M	L	D	M	K	G	N	P	D	S	G	G	I	W	A	P	C	L	S	Y	A	D	G	K	F	W	L	L	Y	T	D	V	K	I	V	D	S	P	W	K	N	G	R	N	F	L	V	T	A	P	S	I	E	G	P	W	S	E	P	I	P	M	G	N	G	.	.	.	.	.	.	.	.	.	.	G	F
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.															.												.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.															.
Template Sequence		Y	P	A	D	D	N	Q	K	E	L	E	W	P	G	G	C	E	D	P	R	V	A	V	T	E	D	G	L	Y	V	X	L	Y	T	Q	W	N	R	.	.	.	.	K	Q	A	R	L	A	V	A	T	S	R	D	L	Q	.	I	W	E	K	Y	G	P	A	F	A	K	A	Y	G	G	R	F	F	D	E	F	S	K
Template Known Secondary structure					S	S	T	T					T	T	T											T	T	S											S	.	.	.	.	S										S	S	S	S	.	S							T	T	S	S					T	T	T	T	S
Template Predicted Secondary structure																																								.	.	.	.															.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		D	P	S	L	F	H	D	D	D	G	R	K	Y	Y	I	Y	R	P	W	G	P	R	H	H	S	N	P	H	N	T	I	V	L	Q	A	F	D	P	Q	T	G	T	L	S	.	.	.	.	.	.	P	E	R	K	T	L	F	T	G	T	P	L	C	Y	T	E	.	.	.	.	.	G	A	H	L	Y	R	H	A	G
Query Conservation																																														.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																																					.									.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																					.
Template Sequence		S	A	S	I	V	T	K	L	V	D	G	K	Q	V	I	A	K	I	D	G	K	Y	W	X	Y	W	G	E	K	F	V	N	V	A	T	.	S	T	D	L	I	N	W	E	P	X	L	D	E	K	G	D	F	L	K	V	I	T	P	R	E	G	K	F	D	S	D	L	T	E	C	G	P	P	A	I	X	T	D	K
Template Known Secondary structure											T	T								T	T								S	S	S	B					.		S	S	S	S	S					B		T	T	S	S	B			S	B				T	T	S	T	T	S	S						S						T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																	.	.																	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																	.	.																	.	.	.
Query Sequence		W	Y	Y	L	M	A	A	E	G	G	T	S	Y	.	.	.	.	.	.	.	.	.	.	E	H	A	V	V	V	L	R	S	K	N	I	D	G	P	Y	.	.	E	L	H	P	D	V	T	M	M	T	S	W	H	L	P	E	.	.	.	N	P	L	Q	K	S	G	H	G	S	L	L	Q	T	H	T	G	E	W	Y
Query Conservation															.	.	.	.	.	.	.	.	.	.																	.	.																	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.										.							.	.																	.	.	.
Template Conservation																																		.
Template Sequence		G	I	L	L	L	Y	N	G	K	N	K	S	G	A	E	G	D	T	L	Y	T	A	N	S	Y	C	A	G	Q	A	L	F	.	D	A	K	D	P	T	K	L	I	D	R	L	D	K	P	F	Y	I	P	E	S	D	F	E	K	S	G	Q	Y	P	A	G	T	V	F	I	E	G	L	V	F	H	N	Q	K	W	Y
Template Known Secondary structure													S	S	T	T	S		T	T	S		T	T										.		S	S		T	T							S	S		S	B				S					S	S	S	S	T	T		B										T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		261	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Y	L	T	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	Y	G	C	A	D
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions