Job Description P77713 Confidence 100.00% Date Wed Jan 25 15:21:12 GMT 2012 Rank 19 Aligned Residues 275 % Identity 23% Template c3qz4B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:endo-1,4-beta-xylanase d; PDBTitle: crystal structure of an endo-1,4-beta-xylanase d (bt_3675) from2 bacteroides thetaiotaomicron vpi-5482 at 1.74 a resolution Resolution 1.74 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.														.	.	.	.
Query SS confidence																		.	.														.	.	.	.
Query Sequence		N	P	I	L	T	G	F	N	P	D	P	S	L	C	R	Q	.	.	G	E	D	Y	Y	I	A	T	S	T	F	E	W	.	.	.	.	F	P	G	V	R	I	Y	H	S	R	D	L	K	N	W	S	L	V	S	T	P	L	D	R	V	S	M	L	D	M	K	G	N	P	D	S	G	G	I	W	A	P	C	L	S
Query Conservation																		.	.														.	.	.	.
Alig confidence																		.	.														.	.	.	.																											.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		N	P	I	L	P	G	F	H	A	D	P	E	V	L	Y	S	H	Q	T	K	R	Y	Y	I	Y	P	T	S	D	G	F	P	G	W	G	G	S	Y	F	K	V	F	S	S	K	N	L	K	T	W	K	E	E	T	V	I	L	E	X	G	K	.	.	.	.	N	V	S	W	A	N	G	N	A	W	A	P	C	I	E
Template Known Secondary structure		S		S	S		S	S										T	T	T	T										S	S	G	G	G											S	S	S	S	S										B	T	T	.	.	.	.	T	B	T	T
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		79	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																																									.	.	.	.	.	.	.	.														.
Query SS confidence					.																																									.	.	.	.	.	.	.	.														.
Query Sequence		Y	A	D	.	G	K	F	W	L	L	Y	T	D	V	K	I	V	D	S	P	W	K	N	G	R	N	F	L	V	T	A	P	S	I	E	G	P	W	S	E	P	I	P	M	.	.	.	.	.	.	.	.	G	N	G	G	F	D	P	S	L	F	H	D	D	.	D	G	R	K	Y	Y	I	Y	R	P	W	G	P	R
Query Conservation					.																																									.	.	.	.	.	.	.	.														.
Alig confidence					.																																									.	.	.	.	.	.	.	.														.													.	.
Template Conservation																																																																																.	.
Template Sequence		E	K	K	I	D	G	K	Y	K	Y	F	F	Y	Y	S	A	N	P	T	T	N	K	G	K	Q	I	G	V	A	V	A	D	S	P	T	G	P	F	T	D	L	G	K	P	I	I	T	S	S	P	T	G	R	G	Q	Q	I	D	V	D	V	F	T	D	P	V	S	G	K	S	Y	L	Y	W	G	N	G	Y	.	.
Template Known Secondary structure						T	T													T	T		S	S									S	S	T	T							S	S		S	B		S		T	T	S	S	S	B	S									T	T	T									B	S	S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																				.	.	.	.	.																												.
Query SS confidence																																				.	.	.	.	.																												.
Query Sequence		H	H	S	N	P	H	N	T	I	V	L	Q	A	F	D	P	Q	T	G	T	L	S	P	E	R	K	T	L	F	T	G	T	P	L	.	.	.	.	.	C	Y	T	E	G	A	H	L	Y	R	H	A	G	W	Y	Y	L	M	A	A	E	G	G	T	S	Y	E	.	H	A	V	V	V	L	R	S	K	N	I	D	G
Query Conservation																																				.	.	.	.	.																												.
Alig confidence		.	.	.	.	.	.	.	.																											.	.	.	.	.																												.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	X	A	G	A	E	L	N	D	D	X	L	S	I	K	E	E	T	T	V	V	L	T	P	K	G	G	T	L	Q	T	Y	A	Y	R	E	A	P	Y	V	I	Y	R	K	G	I	Y	Y	F	F	W	S	V	D	D	T	G	S	P	N	Y	H	V	V	Y	G	T	A	Q	S	P	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	.						B		T	T	S	S	S	B		G	G	G											T	T	T	T												T	T									S		T	T	S	T	T									S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300
Predicted Secondary structure																																					.																																										.
Query SS confidence																																					.																																										.
Query Sequence		P	Y	E	L	H	P	D	V	T	M	M	T	S	W	H	L	P	E	N	P	L	Q	K	S	G	H	G	S	L	L	Q	T	H	T	G	.	E	W	Y	M	A	Y	L	T	S	R	P	L	R	L	P	G	V	P	L	L	A	S	G	G	R	G	Y	C	P	L	G	R	E	T	G	I	A	R	I	E	W	.	R	D
Query Conservation																																					.																																										.
Alig confidence															.	.																					.											.	.	.	.	.	.	.	.	.	.																						.
Template Conservation															.	.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	E	V	A	K	E	P	I	V	L	I	Q	.	.	N	P	K	E	E	I	Y	G	P	A	H	N	S	I	L	Q	V	P	G	K	D	K	W	Y	I	V	Y	H	R	I	N	.	.	.	.	.	.	.	.	.	.	K	N	H	L	N	D	G	P	G	W	H	R	E	V	C	I	D	R	X	E	F	N	P	D
Template Known Secondary structure															.	.	B	G	G	G	T	B												T	T	S	S											.	.	.	.	.	.	.	.	.	.	G	G	G	T	T	S	S	G	G	G											B		T	T
Template Predicted Secondary structure															.	.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.											300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		301	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	P	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	I	K	Q
Template Known Secondary structure		S		B
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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