Job Description P77713 Confidence 100.00% Date Wed Jan 25 15:21:12 GMT 2012 Rank 17 Aligned Residues 278 % Identity 18% Template c3p2nB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:3,6-anhydro-alpha-l-galactosidase; PDBTitle: discovery and structural characterization of a new glycoside hydrolase2 family abundant in coastal waters that was annotated as 'hypothetical3 protein' Resolution 1.95 Å

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		3	.	.						.	.	.	.	10	.	.	.	.	.	.									.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure					.	.	.	.	.												.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.												.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	N	.	.	.	.	.	P	I	L	T	G	F	N	P	D	P	S	.	.	.	.	.	.	.	.	L	C	R	Q	G	E	D	Y	Y	I	A	T	S	T	F	E	W	F	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	I	Y	H	S	R	D	L	K	N	W	S	L	V
Query Conservation					.	.	.	.	.												.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.												.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	Q	F	G	P	L	Q	P	L	K	G	D	L	A	Y	E	E	G	V	V	R	R	D	P	S	A	I	I	K	E	N	G	K	Y	Y	V	W	Y	S	K	S	T	G	P	T	Q	G	F	G	G	D	I	E	K	D	K	V	F	P	W	D	R	C	D	I	W	Y	A	T	S	E	D	G	W	T	W	K	E	E
Template Known Secondary structure														T	T	S			T	T									B				T	T											S					S	S	S		T	T	T	S			S	T	T	T	T									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	P	L	D	R	V	S	M	L	D	M	K	G	N	P	D	S	G	G	I	W	A	P	C	L	S	Y	A	D	G	K	F	W	L	L	Y	T	D	V	K	I	V	D	S	P	W	K	N	G	R	N	F	L	V	T	A	P	S	I	E	G	P	W	S	E	P	I	P	M	G	N	G	G	F	D	P	S	L	F
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		G	P	A	V	T	R	G	E	K	G	A	Y	D	D	.	.	.	.	R	S	V	F	T	V	E	I	M	K	W	E	D	K	Y	Y	L	C	Y	Q	T	V	K	S	P	Y	N	V	R	V	K	N	Q	V	G	L	A	W	A	D	S	P	D	G	P	W	T	K	S	E	E	P	I	L	S	P	A	D	N	G	V	W
Template Known Secondary structure									S	T	T	S	T	T	S	.	.	.	.	S											T	T											S				T	T											S	S	T	T							S	S		S	B				S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		H	D	D	D	G	R	K	Y	Y	I	Y	R	P	W	G	P	R	H	H	S	N	P	H	N	T	I	V	L	Q	A	F	D	P	Q	T	G	T	L	S	P	E	R	K	T	L	F	T	G	T	P	L	C	Y	T	E	G	A	H	L	Y	R	H	A	G	W	Y	Y	L	M	A	A	E	G	G	T	S	Y	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	E	E	Q	D	R	F	A	V	I	K	K	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	S	H	K	V	H	D	P	C	I	I	P	Y	K	G	K	F	Y	L	Y	Y	K	G	E	Q	M	G	E	A	I	T
Template Known Secondary structure			S	S	S			T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S											T	T											T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																																		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
						209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	E	H	A	V	V	V	L	R	S	K	N	I	D	G	P	Y	E	L	H	P	D	V	T	M	M	T	S	W	H	L	P	E	N	P	L	Q	K	S	G	H	G	S	L	L	Q	T	H	T	G	E	W	Y	M	A	Y	L	T	S	R	P	L	R	L	P	G	V	P	L	L	A	S	G	G	R	G	Y
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	G	R	Q	I	R	H	G	V	A	I	A	D	N	P	K	G	P	Y	V	K	S	P	Y	N	P	I	S	N	S	G	H	E	I	C	V	W	P	Y	N	G	G	I	A	S	L	I	T	T	D	G	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T												S	S	T	T							T	T			S		S	S		S	S							T	T								S	S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		285	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		C	P	L	G	R	E	T	G	I	A	R	I	E	W	.	R	D	G	W	P	Y	V	E	G	G	K	H	A	Q	L	T	V	K	G	P	Q	V	A	E	Q	P	A	A	V	P	G	N	W	R	D	D	F	D	A	S	S	L	D	P	E	L	Q	T	L	R	I	P	F	D	D	T	L	G	S	L	T
Query Conservation																.
Alig confidence		.	.	.	.	.	.	.	.							.							.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	K	N	T	I	Q	W	A	P	D	G	I	N	F	.	.	.	.	.	.	.	.	E	I	K	S	V	I	P	G	V	N	A	H	A	I	G	L	N	R	T	A	D	V	E	K	E	P	T	E	I	L	R	W	G	L	T	H	I	Y	N	N	G	D	Y	Q	S	I	M
Template Known Secondary structure		.	.	.	.	.	.	.	.		S						T	T	S	S	S		.	.	.	.	.	.	.	.							S						S		B		B	T	T	S		G	G	G	S	T	T	G	G	G	G								S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
										331	.	.	.	.	.	.	.	.	340	.	.	.									.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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