 |
Job Description | P77713 | Confidence | 23.80% | Date | Wed Jan 25 15:21:12 GMT 2012 |
Rank | 86 | Aligned Residues | 65 |
% Identity | 11% | Template | c3oyoB_ |
PDB info |
PDB header:plant protein | Chain: B: PDB Molecule:hemopexin fold protein cp4; |
PDBTitle: crystal structure of hemopexin fold protein cp4 from cow pea
|
Resolution | 2.10 Å |
|
 |
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | G | F | D | P | S | L | F | H | D | D | D | G | R | K | Y | Y | I | Y | R | P | W | G | P | R | H | H | S | N | P | H | N | T | I | V | L | Q | A | F | D | P | Q | T | G | T | L | S | P | E | R | K | T | L | F | T | G | T | P | . |
. |
. |
. |
. |
. |
. |
L | C | Y | T | E | G | A | H | L | Y | R | H | A | G |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |
|
|
|   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |
Template Sequence |   |
E | D | S | I | D | S | A | F | R | S | T | K | G | K | E | V | Y | L | F | K | G | N | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | V | R | I | A | Y | D | S | K | Q | L | V | G | N | I | R | N | I | G | D | G | F | P | V | L | N | G | T | E | F | E | S | G | I | D | A | C | F | A | S | H | K | E | P |
Template Known Secondary structure |   |
S | S |
|
|
|  |  |  |  |
| S | S | T | T |  |  |  |  |  |  | T | T |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | T | T | S | T | T | T | T |
|
| S |  |  |  |  |
| S | S | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
  |
  |   |
196 | . | . | . | 200 |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
W | Y | Y | L | M |
Query Conservation |   |
  |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
Template Sequence |   |
E | A | Y | L | F |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
184 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|