Job Description P77713 Confidence 19.19% Date Wed Jan 25 15:21:12 GMT 2012 Rank 91 Aligned Residues 215 % Identity 13% Template c3ilfA_ PDB info PDB header:hydrolase/carbohydrate Chain: A: PDB Molecule:porphyranase a; PDBTitle: crystal structure of porphyranase a (pora) in complex with2 neo-porphyrotetraose Resolution 1.80 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.					.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.												.
Predicted Secondary structure																															.			.	.	.	.												.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.			.	.	.	.												.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	G	P	Q	V	A	E	Q	P	A	A	V	P	G	N	W	R	D	D	F	D	A	S	S	L	D	P	E	.	L	Q	.	.	.	.	T	L	R	I	P	F	D	D	T	L	G	.	.	S	L	T	A	R	P	G	F	L	R	L	Y	G	N	D	S	L	N	S	.	.	.	.	.	.	.	.	.	.	.	T
Query Conservation																															.			.	.	.	.												.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.			.	.	.	.												.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	P	S	P	T	N	G	K	K	W	E	K	V	E	Q	L	S	D	E	F	D	G	N	S	I	D	T	N	K	W	Y	D	Y	H	P	F	W	E	G	R	A	P	S	N	F	K	K	G	D	A	F	V	S	D	G	F	L	N	L	R	S	T	L	R	K	E	P	S	S	V	Q	D	P	F	K	D	I	W	V
Template Known Secondary structure							G	G	G							G	G	G		B				S	S	S			T	T	T			S	S		T	T				S	T	T					T	T	S					T	T									S	S		G	G	G	S	S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.										.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.
Query Sequence		F	T	Q	S	T	V	A	R	R	W	Q	H	F	A	F	R	A	E	T	R	M	E	F	S	P	V	H	F	Q	Q	S	A	G	L	T	C	Y	Y	N	S	K	N	W	S	Y	C	F	V	D	Y	E	E	G	Q	G	R	.	.	.	.	.	.	.	.	.	T	I	K	V	I	Q	L	D	H	N	V	P	S	W	P
Query Conservation																																																										.	.	.	.	.	.	.	.	.
Alig confidence																												.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		D	A	A	A	A	V	S	K	T	K	A	Q	P	G	Y	Y	Y	E	A	R	F	M	A	S	S	L	.	.	S	M	T	S	S	F	W	F	R	V	G	Q	F	S	S	I	D	V	I	E	H	I	G	D	P	S	K	E	N	R	Q	D	D	L	P	Y	Q	Y	H	V	N	T	H	Y	Y	G	K	H	A	G	L	Q
Template Known Secondary structure														T	T											S	S	.	.	S	S									S	S	S										S	S		S	S	G	G	G	T	T	T	G	G	G										G	G	G	T	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.			.	.	.	.	.		.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.					490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.						.																						.	.	.	.																														.	.
Query SS confidence																		.	.						.																						.	.	.	.																														.	.
Query Sequence		L	H	E	Q	P	I	P	V	P	E	H	A	E	S	V	W	.	.	L	R	V	D	V	.	D	T	L	V	Y	R	Y	S	Y	S	F	D	G	E	T	W	H	T	V	P	V	.	.	.	.	T	Y	E	A	W	K	L	S	D	D	Y	I	G	G	R	G	F	F	T	G	A	F	V	G	L	H	C	E	D	.	.
Query Conservation																		.	.						.																						.	.	.	.																														.	.
Alig confidence																		.	.						.									.	.												.	.	.	.																														.	.
Template Conservation																																		.	.
Template Sequence		P	L	G	T	E	Y	K	M	P	G	R	G	R	D	N	F	Y	T	Y	G	F	W	W	K	S	P	N	E	L	L	F	Y	.	.	F	N	G	K	Q	V	M	R	I	V	P	R	V	P	L	D	E	E	L	R	M	I	F	D	T	E	V	F	P	F	A	T	A	G	V	A	N	I	G	L	P	K	P	E	N	L
Template Known Secondary structure										S	S		G	G	G												T	T						.	.		T	T									S	S				S												S	S	S	B	T	T	B
Template Predicted Secondary structure																																		.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	G	D	G	C	Y	A	D	F	D	Y	F	T	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	N	S	K	N	T	M	K	V	D	W	V	R	V
Template Known Secondary structure		T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions