Job Description P77713 Confidence 85.14% Date Wed Jan 25 15:21:12 GMT 2012 Rank 55 Aligned Residues 151 % Identity 15% Template c3fbyC_ PDB info PDB header:cell adhesion Chain: C: PDB Molecule:cartilage oligomeric matrix protein; PDBTitle: the crystal structure of the signature domain of cartilage oligomeric2 matrix protein. Resolution 3.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.														.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	T	V	A	R	R	W	Q	H	F	A	F	R	A	E	T	R	M	E	F	S	P	V	H	F	Q	Q	S	A	G	L	T	C	.	Y	Y	N	S	K	N	W	S	Y	C	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	E	E	G	Q	G	R	T	I	K	V	I	Q	L	D	H	N	V	P
Query Conservation																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																																	.
Template Sequence		P	G	L	A	V	G	Y	T	A	F	N	G	V	D	F	E	G	T	F	H	V	N	T	V	T	D	D	D	Y	A	G	F	I	F	G	Y	Q	D	S	S	S	F	Y	V	V	M	W	K	Q	M	E	Q	T	Y	W	Q	A	N	P	F	R	A	V	A	E	P	G	I	Q	L	K	A	V	K	S	S	T	G	P	.
Template Known Secondary structure		S										S	S												S	S														T	T									S	S					S				S	S						S	S									S	S		T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.								.	.	470	.	.	.	.	.	.	.	.	.	480	.	.		.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.																.
Query SS confidence																									.	.	.	.	.	.	.																.
Query Sequence		S	W	P	L	H	E	Q	P	I	P	V	P	E	H	A	E	S	V	W	L	R	V	D	.	.	.	.	.	.	.	V	D	T	L	V	Y	R	Y	S	Y	S	F	D	G	E	.	T	W	H	T	V	P	V	T	Y	E	A	W	K	L	S	D	D	Y	I	G	G	R	G	F	F	T	G	A	F	V	G	L	H	C
Query Conservation																									.	.	.	.	.	.	.																.
Alig confidence																									.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		G	E	Q	L	R	N	A	L	W	H	T	G	D	T	E	S	Q	V	R	L	L	W	K	D	P	R	N	V	G	W	K	D	K	K	S	Y	R	W	F	L	Q	H	R	P	Q	V	G	Y	I	R	V	R	F	Y	E	G	P	E	L	V	A	D	S	N	V	V	L	D	T	T	M	R	G	G	R	L	G	V	F	C
Template Known Secondary structure		T									S	S	S		B	T	T	T								T	T						T	T											T	T	T	T									T	T													S		S	S
Template Predicted Secondary structure
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	I	S	G	D	G	C	Y	A	D	F	D	Y	F	T	Y	E
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		F	S	Q	E	N	.	.	.	.	I	I	W	A	N	L	R	Y	R
Template Known Secondary structure			S				.	.	.	.
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		727	.	.	730	.					.	.	.	.	.	.	.	.	740

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions