Job Description P77713 Confidence 54.68% Date Wed Jan 25 15:21:12 GMT 2012 Rank 72 Aligned Residues 200 % Identity 18% Template c3azyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:laminarinase; PDBTitle: crystal structure of the laminarinase catalytic domain from thermotoga2 maritima msb8 Resolution 1.65 Å

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		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.																.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		P	G	N	W	R	D	D	F	D	A	S	S	L	D	P	E	L	Q	T	L	R	I	P	F	D	D	T	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	T	A	R	P	G	F	L	R	L	Y	G	N	D	.	.	S	L	N	S	T	F	T	Q	S	T	V	A	R	R	W	Q	H	F	A
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		Q	L	V	W	S	Q	E	F	D	D	G	V	I	D	P	N	I	W	N	F	E	I	G	N	G	H	A	K	G	I	P	G	W	G	N	G	E	L	E	Y	Y	T	D	E	N	A	F	V	E	N	G	C	L	V	I	E	A	R	K	E	Q	V	S	D	E	Y	G	T	Y	D	Y	T	S	A	R	M	T	T	E	G
Template Known Secondary structure											S	S	S			T	T	T						B	S	S	G	G	G	T		G	G	G	G	T	T							S	S	S					T	T														S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
								391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.								.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																											.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																											.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	F	R	A	E	T	R	M	E	F	S	P	V	H	F	Q	Q	S	A	G	L	T	C	Y	Y	N	S	.	.	.	.	.	.	.	K	N	W	S	Y	C	F	V	D	Y	E	E	G	Q	G	R	T	I	K	V	I	Q	L	D	H	N	V	P	S	W	P	L	H	E	Q	P	I	P	V	P	E
Query Conservation		.	.	.	.	.	.																											.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.													.														.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		K	F	E	I	K	Y	G	K	I	E	I	R	A	K	L	P	K	G	.	K	G	I	W	P	A	L	W	M	L	G	N	N	I	G	E	V	G	W	P	T	C	G	E	I	D	I	M	E	M	L	G	H	D	T	R	T	V	Y	G	T	A	H	G	P	G	Y	S	G	G	A	S	I	G	V	A	Y	H	L	P	E
Template Known Secondary structure		T				S	S												S	.	T	T										T	T						T	T	T	T										T	T		T	T								B	T	T	B		G	G	G										T
Template Predicted Secondary structure																				.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		458						.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure			.	.	.	.	.																																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.																																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	.	.	.	.	.	A	E	S	V	W	L	R	V	D	V	D	T	L	V	Y	R	Y	S	Y	S	F	D	G	E	T	W	H	T	V	P	V	T	Y	E	A	W	K	L	S	D	D	Y	I	G	G	R	G	F	F	T	G	A	F	V	G	L	H	C	E	D	I	S	G	D	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.	.																																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.																			.	.										.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.										.	.	.	.	.	.
Template Sequence		G	V	P	D	F	S	E	D	F	H	I	F	S	I	E	W	D	E	D	E	V	E	W	Y	.	.	V	D	G	Q	L	Y	H	V	L	.	.	.	.	.	.	S	K	D	E	L	A	E	L	G	L	E	W	V	F	D	H	P	F	F	L	I	L	N	V	A	V	G	G	Y	W	P	G	Y	P	D	E	T	T	Q
Template Known Secondary structure		T	S			T	T	T	S										T	T						.	.		T	T							.	.	.	.	.	.								T	T						S	S													T	T	T					T	T	S
Template Predicted Secondary structure																										.	.										.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.							.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
			523	.	.	.	.	.	.	530	.	.		.	.	.	.
Predicted Secondary structure		.											.
Query SS confidence		.											.
Query Sequence		.	G	C	Y	A	D	F	D	Y	F	T	.	Y	E	P	V
Query Conservation		.											.
Alig confidence		.											.
Template Conservation
Template Sequence		F	P	Q	R	M	Y	I	D	Y	I	R	V	Y	K	D	M
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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