Job Description P77713 Confidence 99.57% Date Wed Jan 25 15:21:12 GMT 2012 Rank 39 Aligned Residues 195 % Identity 17% Template c2yfrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:levansucrase; PDBTitle: crystal structure of inulosucrase from lactobacillus2 johnsonii ncc533 Resolution 1.75 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.											110
Predicted Secondary structure																																								.																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.																															.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	D	L	K	N	W	S	L	V	S	T	P	L	D	R	V	S	M	L	D	M	K	G	N	P	D	S	G	G	I	W	A	P	C	L	S	Y	.	A	D	G	K	F	W	L	L	Y	T	D	V	K	I	V	D	S	P	W	K	N	G	R	N	F	L	V	T	A	P	.	.	.	.	.	.	.	.	.	.	S
Query Conservation																																								.																															.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		D	N	D	F	N	H	W	K	N	A	G	P	I	F	.	.	.	.	.	.	.	.	G	L	G	T	P	V	I	Q	Q	W	S	G	S	A	T	L	N	K	D	G	S	I	Q	L	Y	Y	T	K	V	D	T	S	D	N	N	T	N	H	Q	K	L	A	S	A	T	V	Y	L	N	L	E	K	D	Q	D	K	I	S
Template Known Secondary structure					G	G	G							T	T	.	.	.	.	.	.	.	.		S			T	T												T	T	S												T	T	T	T																	G	G	G	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.									330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.																						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	G	P	W	S	E	P	I	P	M	G	N	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	P	S	L	F	H	D	D	D	G	R	K	Y	Y	I	Y	R	P	W	G	P	R	H	H	S	N	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	H	V	D	N	D	H	I	V	F	E	G	D	G	Y	H	Y	Q	T	Y	D	Q	W	K	E	T	N	K	G	A	D	N	I	A	M	R	D	A	H	V	I	D	D	D	N	G	N	R	Y	L	V	F	E	A	S	T	G	T	E	N	Y	Q	G	D	D	Q	I	Y	Q	W	L	N	Y	G	G	T	N	K	D
Template Known Secondary structure																S	S	S	B											S	S															T	T											B		T	T	S			S	G	G	G	G	G	B	G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
																								155	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																																					.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																																					.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	I	V	L	Q	A	F	D	P	Q	T	G	.	.	.	.	.	T	L	S	P	E	R	K	T	L	F	T	G	T	P	L	C	Y	T	E	G	A	H	L	Y	R	H	A	G	W	Y	Y	L	M	A	A	E	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																																					.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																.	.																				.	.	.	.
Template Conservation																																																									.	.
Template Sequence		N	L	G	D	F	F	Q	I	L	S	N	S	D	I	K	D	R	A	K	W	S	N	A	A	I	G	I	I	K	L	N	D	D	V	K	N	P	S	V	A	K	V	Y	S	P	L	I	S	A	P	M	V	S	D	E	.	.	I	E	R	P	D	V	V	K	L	G	N	K	Y	Y	L	F	A	A	T	R	L	N	R
Template Known Secondary structure																																	S		T	T	S										S				T	T	T	B	S		.	.										T	T										G	G	G
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.			.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
													204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	G	T	S	Y	E	H	A	V	V	V	L	R	S	K	N	I	D	G	P	Y	E	L	H	P	D	V	T	M	M	T	S	W	H	L	P	E	N	P	L	Q	K	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	N	D	D	A	W	M	A	T	N	K	A	V	G	D	N	V	A	M	I	G	Y	V	S	D	N	L	T	H	G	Y	V	P	L	N	E	S	G	V	V	L	T	A	S	V	P	A	N	W	R	T	A	T
Template Known Secondary structure		B	S													S											S	S	S	S	S					T	T	T	T	S							S		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions