Job Description P77713 Confidence 77.12% Date Wed Jan 25 15:21:12 GMT 2012 Rank 58 Aligned Residues 170 % Identity 15% Template c2w38A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sialidase; PDBTitle: crystal structure of the pseudaminidase from pseudomonas2 aeruginosa Resolution 1.90 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		W	A	P	C	L	S	Y	A	D	G	K	F	W	L	L	Y	T	D	V	K	I	V	D	S	P	W	K	N	G	R	N	F	L	V	T	A	P	S	I	E	G	P	W	S	E	P	I	P	M	.	.	.	.	G	N	G	G	F	D	P	S	L	F	H	D	D	D	G	R	K	Y	Y	I	Y	R	P	W	G	P	R
Query Conservation																																																			.	.	.	.
Alig confidence																															.	.	.																		.	.	.	.
Template Conservation																															.	.	.
Template Sequence		F	G	Q	M	D	I	L	S	D	G	S	L	Y	L	I	Y	R	R	A	T	E	H	V	G	G	S	D	G	R	.	.	.	V	V	F	S	K	L	E	G	G	I	W	S	A	P	T	I	V	A	Q	A	G	G	Q	D	F	R	D	V	A	G	G	T	M	P	S	G	R	I	V	A	A	S	T	V	Y	E	T	G
Template Known Secondary structure									T	T	S										S			S	T	T	S				.	.	.								T	T												T	T												T	T	S									T	T	T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	S	N	P	H	N	T	I	V	L	Q	A	F	D	P	Q	T	G	T	L	S	P	E	R	K	T	L	F	T	G	T	P	L	C	Y	T	E	G	A	H	L	Y	R	H	A	G	W	Y	Y	L	M	A	A	E	G	G	T	S	Y	E	H	A	V	V	V	L	R	S	K	N	I	D	G	P	Y	E	L	H	P
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																																															.
Template Conservation				.	.	.	.	.	.	.	.																																															.
Template Sequence		E	V	.	.	.	.	.	.	.	.	K	V	Y	V	S	D	D	S	G	V	T	W	V	H	K	F	T	L	A	R	G	G	A	D	Y	N	F	A	H	G	K	S	F	Q	V	G	A	R	Y	V	I	P	L	Y	A	A	.	T	G	V	N	Y	E	L	K	W	L	E	S	S	D	G	G	E	T	W	G	E	G	S
Template Known Secondary structure				.	.	.	.	.	.	.	.						S	S	T	T	S											T	T	S	S						S	B					T	T										.		T	T										S	S	S	S	S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																																															.
Template SS confidence
		101	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	T	M	M	T	S	W	H	L	P	E	N	P	L	Q	K	S	G	H	G	S	L	L	Q	T	H	T	G	E	W	Y	M	A	Y
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.
Template Sequence		T	I	Y	S	G	.	.	.	.	.	.	.	.	.	N	T	P	Y	N	E	T	S	Y	L	P	V	G	D	G	V	I	L	A	V	A
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	S	S											S	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.										.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions