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Job DescriptionP77713
Confidence59.86%DateWed Jan 25 15:21:12 GMT 2012
Rank69Aligned Residues165
% Identity13%Templatec2w20B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:sialidase a; PDBTitle: structure of the catalytic domain of the native nana2 sialidase from streptococcus pneumoniae
Resolution1.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.... .....50.... .....60.........70.........80 .........90.........100.........110.
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Query Sequence  IYHSRD. LKNWSLVSTP. . . . . LDRVSMLDMKGNPDSGGIWAPCLSYA. DGKFWLLYTDVKIVDSPWKNGRNFLVTAPSI
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Template Sequence  IIYSDDHGKTWHAGEAVNDNRQVDGQKIHSSTMNNRRAQNTESTVVQLNNGDVKLFM. . . . . . . . RGLTGDLQVATSKDG
Template Known Secondary structure  SSTTSS



TTTTTT
TTT


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   606...610.........620.........630.........640.........650.........660.. .......670.......
 
   112.......120........ .130.........140.........150.........160.........170.........180......
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Query Sequence  EGPWSEPIPMGNGGFDP. . . . . SLFHDDDGRKYYIYRPWGPRHHSNPHNTIVLQAFDPQTGTLSPERKTLFTGTPLCYTE
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Template Sequence  GVTWEKDIKRYPQVKDVYVQMSAIHTMHEGKEYIILSN. . AGGPKRENGMVHLARVEENGELTWLKHNPIQKGEFA. . . Y
Template Known Secondary structure  SSS

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   678.680.........690.........700.........710..... ....720.........730.........740.........750. .
 
   187..190.........200.........210......
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Query Sequence  GAHLYRHAGWYYLMAAEGGTSYEHAVVVLR
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Template Sequence  NSLQELGNGEYGILYEHTEKGQNAYTLSFR
Template Known Secondary structure  TT

TTB
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   753......760.........770.........780..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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