Job Description P77713 Confidence 34.56% Date Wed Jan 25 15:21:12 GMT 2012 Rank 82 Aligned Residues 166 % Identity 13% Template c2vvzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:sialidase a; PDBTitle: structure of the catalytic domain of streptococcus2 pneumoniae sialidase nana Resolution 2.5 Å

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		39	40	.	.	.	.		.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure								.									.	.	.	.	.																													.
Query SS confidence								.									.	.	.	.	.																													.
Query Sequence		I	Y	H	S	R	D	.	L	K	N	W	S	L	V	S	.	.	.	.	.	T	P	L	D	R	V	S	M	L	D	M	K	G	N	P	D	S	G	G	I	W	A	P	C	L	S	Y	A	.	D	G	K	F	W	L	L	Y	T	D	V	K	I	V	D	S	P	W	K	N	G	R	N	F	L	V	T	A	P	S	I
Query Conservation								.									.	.	.	.	.																													.
Alig confidence								.									.	.	.	.	.																													.									.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.
Template Sequence		I	I	Y	S	D	D	H	G	K	T	W	H	A	G	E	A	V	N	D	N	R	Q	V	D	G	Q	K	I	H	S	S	T	M	N	N	R	R	A	Q	N	T	E	S	T	V	V	Q	L	N	N	G	D	V	K	L	F	M	.	.	.	.	.	.	.	.	R	G	L	T	G	D	L	Q	V	A	T	S	K	D	G
Template Known Secondary structure						S	S	T	T	S								T	T	T	T				T	T					T	T	T				S	T	T				S							T	T	S							.	.	.	.	.	.	.	.			S	S	S								S	S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Template SS confidence
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.									.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		E	G	P	W	S	E	P	I	P	M	G	N	G	G	F	D	P	.	.	.	.	.	S	L	F	H	D	D	D	G	R	K	Y	Y	I	Y	R	P	W	G	P	R	H	H	S	N	P	H	N	T	I	V	L	Q	A	F	D	P	Q	T	G	T	L	S	P	E	R	K	T	L	F	T	G	T	P	L	C	Y	T	E
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.																	.	.																																					.	.	.
Template Conservation																																								.	.																																					.	.	.
Template Sequence		G	V	T	W	E	K	D	I	K	R	Y	P	Q	V	K	D	V	Y	V	Q	M	S	A	I	H	T	M	H	E	G	K	E	Y	I	I	L	S	N	.	.	A	G	G	P	K	R	E	N	G	M	V	H	L	A	R	V	E	E	N	G	E	L	T	W	L	K	H	N	P	I	Q	K	G	E	F	A	.	.	.	Y
Template Known Secondary structure		S	S	S			S												S											T	T	S								.	.			S	S	S	S												S	S	S																	.	.	.
Template Predicted Secondary structure																																								.	.																																					.	.	.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.			.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.				.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	H	L	Y	R	H	A	G	W	Y	Y	L	M	A	A	E	G	G	T	S	Y	E	H	A	V	V	V	L	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	L	Q	E	L	G	N	G	E	Y	G	I	L	Y	E	H	T	E	K	G	Q	N	A	Y	T	L	S	F	R	K
Template Known Secondary structure									T	T											T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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