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Job DescriptionP77713
Confidence100.00%DateWed Jan 25 15:21:12 GMT 2012
Rank1Aligned Residues533
% Identity57%Templatec2exiA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-d-xylosidase; PDBTitle: structure of the family43 beta-xylosidase d15g mutant from geobacillus2 stearothermophilus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  EITNPILTGFNPDPSLCRQGEDYYIATSTFEWFPGVRIYHSRDLKNWSLVSTPLDRVSMLDMKGNPDSGGIWAPCLSYAD
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Template Sequence  KIKNPILTGFHPGPSICRVGDDYYIAVSTFEWFPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSYSD
Template Known Secondary structure 
S
SB
SS

S
TT

BTSB
SSSSS


B
STTT


TT

TT
BB
S
T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  GKFWLLYTDVKIVDSPWKNGRNFLVTAPSIEGPWSEPIPMGNGGFDPSLFHDDDGRKYYIYRPWGPRHHSNPHNTIVLQA
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Template Sequence  GKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSDPIYLNSSGFDPSLFHDEDGRKYLVNMYWDHRVDHHPFYGIVLQE
Template Known Secondary structure  T


SSS


SSSSS







S
S


TTS



TTS
S
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  FDPQTGTLSPERKTLFTGTPLCYTEGAHLYRHAGWYYLMAAEGGTSYEHAVVVLRSKNIDGPYELHPDVTMMTSWHLPEN
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Template Sequence  YSVEQKKLVGEPKIIFKGTDLRITEGPHLYKINGYYYLLTAEGGTRYNHAATIARSTSLYGPYEVHPDNPLLTSWPYPRN
Template Known Secondary structure  TTTT


TT


TTS
SSTT
SSTT



TT

SSTT
TT
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  PLQKSGHGSLLQTHTGEWYMAYLTSRPLRLPGVPLLASGGRGYCPLGRETGIARIEWRDGWPYVEGGKHAQLTVKGPQVA
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Template Sequence  PLQKAGHASIVHTHTDEWFLVHLTGRPLPREGQPLLEH. . RGYCPLGRETAIQRLEWKDGWPYVVGGNGPSLEIDGPSVE
Template Known Secondary structure  S

TTS





TTS
TTT
..



TT
TTSSSSS

S


SS
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   243......250.........260.........270.........280 .........290.........300.........310.........320
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  EQPAAVPGNWRDDFDASSLDPELQTLRIPFDDTLGSLTARPGFLRLYGNDSLNSTFTQSTVARRWQHFAFRAETRMEFSP
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Template Conservation             


    
   
     
      

    
 
 
              
 

         
 
    
Template Sequence  EVSWEKDYDEKDDFDGDTLNHHFQTLRIPLGEDIATLKARPGHLRLYGRESLTSRFTQAFVARRWQHFHFVAETKVSFRP
Template Known Secondary structure 





SS
S


SSS

TT
BSS


TTTSSSSTT

BS
TT
SS



SS

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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
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Query Sequence  VHFQQSAGLTCYYNSKNWSYCFVDYEEGQGRTIKVIQLDHNVPSWPLHEQPIPVPEHAESVWLRVDVDTLVYRYSYSFDG
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Template Sequence  TTFQQSAGLVNYYNTQNWTTLQITWHEEKGRILELMTCDHLVVDQPLRGREIVVPDDIEYVYLRVTVQATTYKYSYSFDG
Template Known Secondary structure  SSTTTTTTTTT
TTTT



TT


TTSSS
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   401........410.........420.........430.........440.........450.........460.........470.........480
 
   482.......490.........500.........510.........520.........530......
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Query Sequence  ETWHTVPVTYEAWKLSDDYIGGRGFFTGAFVGLHCEDISGDGCYADFDYFTYEPV
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Template Sequence  MNWIDLPVTFESYKLSDDYIKSRAAFTGAFVGMHCRDGSGQNNYADFDYFLYKEL
Template Known Secondary structure  S


S

GGGGSGGG
TTS


S

TT
S


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   481........490.........500.........510.........520.........530.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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