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Job DescriptionP77713
Confidence99.74%DateWed Jan 25 15:21:12 GMT 2012
Rank33Aligned Residues419
% Identity14%Templatec2aezA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:fructan 1-exohydrolase iia; PDBTitle: crystal structure of fructan 1-exohydrolase iia (e201q) from cichorium2 intybus in complex with 1-kestose
Resolution3.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10...... ...20.........30. ....... .40.........50.........60.........70.........80 .
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Query Sequence  GFNPDPS. LCRQGEDYYIATSTF. . . . EWFPGVR. . IYHSRDLKNWSLVSTPLDRVSMLDMKGNPDSGGIWAPCLSYA. D
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Template Sequence  NWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQEADS. . . . . . KSCWSGSATILPG
Template Known Secondary structure  TTTT
SS

S

SSSSS

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SGGGT......TTT
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   18.20.........30.........40.........50.........60.........70........ .80.........90.
 
   82.......90.........100.........110.........120. ........130.........140.......
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Query Sequence  GKFWLLYTDVKIVDSPWKNGRNFLVTAPSIEGPWSEPIPM. . . . . . . . . . . . . . GNGGFDPSLFHDDDGRKYYIYRPWGP
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Template Sequence  NIPAMLYTGSDSKSR. . . . QVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVG. . .
Template Known Secondary structure  T
TT

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   92.......100...... ...110.........120.........130.........140.........150.........160....
 
   148.150.........160.........170.........180.........190..... ....200.
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Query Sequence  RHHSNPHNTIVLQAFDPQTGTLSPERKTLFTGTPLCYTEGAHLYRHAG. . . . . . . . . . . . . . . . . . . . . . . . . . WYYLMA
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Template Sequence  GDRDNNGMAFLYQSTDFVNWKRYDQP. . LSSADATGTWQCPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGHDWYTIG
Template Known Secondary structure  TTSSSSS

SS
..S
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TT
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TT

SSSTT
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   165....170.........180.........190 .........200.........210.........220.........230.........240..
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  AEGGTSYEHAVVVLRSKNIDGPYELHPDVTMMTSWHLPENPLQKSGHGSLLQTHTGEWYMAYLTSRPLRLPGVPLLASGG
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Template Sequence  TYSPDR. . . . . ENFLPQNGLSLTGSTLDLRY. . . . . . DYGQFYASK. . SFFDDAKNRRVLW. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT.....TTTS



SSTTSS......BSSS
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   243..... .250.........260........ .270....... ..280.........290
 
   282.......290.........300.........310.........320.........330.........340.........350.........360.
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Query Sequence  RGYCPLGRETGIARIEWRDGWPYVEGGKHAQLTVKGPQVAEQPAAVPGNWRDDFDASSLDPELQTLRIPFDDTLGSLTAR
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Template Sequence  . . . . . . . . . . . . . . . AWVPET. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DSQADDIEKGWAGLQSFPRALWIDRN
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TT
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   291..... ...300.........310.........320..
 
   362.......370..... ....380.........390.........400......
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Query Sequence  PGFLRLYGNDSLNS. . . . . . . . . . . TFTQSTVARRWQHFAFRAETRMEFSPVHFQQ. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRG
Template Known Secondary structure  SSS
GGGGGG
TT
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TTS
GGG



SS

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   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   407..410.........420.........430......... 440.........450.........460.........470....
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Query Sequence  . . . SAGLTCYYNSKNWSYCFVDYEEGQGRTIKVIQL. . . . . . . . . DHNVPSWPLHEQPIPVPEHAESVWLRVDVDTLVYR
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Template Sequence  ALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSIIE
Template Known Secondary structure  S
TTSSS

TTS
GGGS


SS





S
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TT
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   403......410.........420.........430.........440.........450.........460.........470.........480..
 
   475....480.........490.........500.........510.........520.........530......
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Query Sequence  YSYSFDGETWHTVPVTYEAWKLSDDYIGGRGFFTGAFVGLHCEDISGDGCYADFDYFTYEPV
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Template Sequence  S. FGAGGK. . . . . . . . . . . TCITSRIYPKFVNNEEAHLFVFNNG. TQNVKISEMSAWSMKNA
Template Known Secondary structure  .GGGT...........


SGGGTS


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   483 ...... 490.........500.........510.... .....520.........530.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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