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Job DescriptionP77713
Confidence99.85%DateWed Jan 25 15:21:12 GMT 2012
Rank30Aligned Residues428
% Identity15%Templatec1y9gA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:exo-inulinase; PDBTitle: crystal structure of exo-inulinase from aspergillus awamori complexed2 with fructose
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10...... ...20.........30.........40 .........50.........60.........70.........80
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Query Sequence  GFNPDPS. LCRQGEDYYIATSTFEWFPGVRIY. . . . . . . . HSRDLKNWSLVSTPLDRVSMLDMKGNPDSGGIWAPCLSYA
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Template Sequence  NWMNDPNGLLYHNGTYHLF. . . FQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVT. . . . EMYFSGSAVAD
Template Known Secondary structure  TT...
TT
SSS
S
SSSSS


BTTTS


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   37..40.........50..... ....60.........70.........80.........90........ .100.........
 
   81 ........90....... ..100.........110......... 120.......
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Query Sequence  D. . . . . . . . . . . GKFWLLYTDVKIVDSP. . . . . . . . WKNGRNFLVTAPSIEGPWSEPI. . . . . . . . . . . . . . PMGNGGFD
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Template Sequence  VNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRD
Template Known Secondary structure  TT
SSS


SSS

SS

TTS

TTSSTTSS

TTT

SB
S

TT
GGGTTS
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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   128.130.........140.........150.........160.........170.........180.........190... ......200.
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Query Sequence  PSLFHDDDGRKYYIYRPWGPRHHSNPHNTIVLQAFDPQTGTLSPERKTLFTGTPLCYTEGAHLYRH. . . . . . AGWYYLMA
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Template Sequence  PFVFWHDESQKWVVVTSIAE. . . . . LHKLAIYTSDNLKDWKLVSEFGPY. . NAQGGVWECPGLVKLPLDSGNSTKWVITS
Template Known Secondary structure  TTTTGG.....GTSSSSS



..S

SSTTTT
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   190.........200......... 210.........220.........230... ......240.........250.........260..
 
   202 .......210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  A. . . . EGGTSYEHAVVVLRSKNIDGPYELHPDVTMMTSWHLPENPLQKSGHGSLLQTHTGEWYMAYLTSRPLRLPGVPLL
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Template Sequence  GLNPGGPPGTVGSGTQYFVGEFDGTTFTPDAD. . . . . . . . . . . . . TVYPGNSTANWMDWGPDFYAAAGYNG. . . . . . . . .
Template Known Secondary structure  S

STT

S

SS

TT.............TS
SSSS

S

SSS

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   263......270.........280.........290.... .....300.........310.........320
 
   278.280.........290.........300.........310.........320.........330.........340.........350.......
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Query Sequence  ASGGRGYCPLGRETGIARIEWRDGWPYVEGGKHAQLTVKGPQVAEQPAAVPGNWRDDFDASSLDPELQTLRIPFDDTLGS
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Template Sequence  . . . . . . . LSLNDHVH. . . IGWMNNW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QYGANIPTYPWRSAMAIPRHMA
Template Known Secondary structure  .......

TT

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S
T.................................TTGGG


SS

B


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   321....... .330..... ....340.........350.......
 
   358.360... ......370.........380..... ....390.........400.........410.........420....
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Query Sequence  LTARPG. . FLRLYGNDSLNSTFTQSTVARR. . . . . . . . . . . WQHFAFRAETRMEFSPVHFQQSAGLTCYYNSKNWSYCFV
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Template Conservation 
        
   

 

  

                           

             

 
           
Template Sequence  LKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSAKSKASTFAIALRASANFTEQTLV
Template Known Secondary structure  TT
S
GGGTB
SS
S
S




SSTT
SSS
TTSSS
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   358.360.........370.........380.........390.........400.........410.........420.........430.......
 
   425....430.........440.........450...... ...460.........470.........480.........490.........500.
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Query Sequence  DYEEGQGRTIKVIQLDHNVPSWPLHEQPIPVP. . . EHAESVWLRVDVDTLVYRYSYSFDGETWHTVPVTYEAWKLSDDYI
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Template Sequence  GYDFAKQQIFLDRTHSGDVSFDETFASVYHGPLTPDSTGVVKLSIFVDRSSVEV. FGGQGE. . . . . . TTLTAQIFPSSDA
Template Known Secondary structure  TTTTSS

TT
TTSS




TTSTT.TTTT......



TT
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   438.440.........450.........460.........470.........480.........490. ...... ..500.........510
 
   502.......510.........520.........530......
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Query Sequence  GGRGFFTGAFVGLHCEDISGDGCYADFDYFTYEPV
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Template Sequence  VH. . . . . . . . ARLAST. . . . . GGTTEDVRADIYKI
Template Known Secondary structure 
.............SS
B
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   511. ...... .520.........530..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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