Job Description P77713 Confidence 99.37% Date Wed Jan 25 15:21:12 GMT 2012 Rank 43 Aligned Residues 200 % Identity 16% Template c1w18A_ PDB info PDB header:transferase Chain: A: PDB Molecule:levansucrase; PDBTitle: crystal structure of levansucrase from gluconacetobacter2 diazotrophicus Resolution 2.5 Å

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		37	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.		80			.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																											.	.									.		.	.													.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.																											.	.									.		.	.													.	.	.
Query Sequence		V	R	I	Y	H	S	R	D	L	.	.	.	.	.	.	.	.	.	K	N	W	S	L	V	S	T	P	L	D	R	V	S	M	L	D	M	K	G	N	P	D	S	G	G	.	.	I	W	A	P	C	L	S	Y	.	A	.	.	D	G	K	F	W	L	L	Y	T	D	V	K	.	.	.	I	V	D	S	P	W	K
Query Conservation											.	.	.	.	.	.	.	.	.																											.	.									.		.	.													.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																											.	.									.		.	.													.	.	.
Template Conservation
Template Sequence		I	G	F	F	Y	R	R	A	G	I	P	A	S	R	R	P	V	N	G	G	W	T	Y	G	G	H	L	F	P	D	G	A	S	A	Q	V	Y	A	G	Q	T	Y	T	N	Q	A	E	W	S	G	S	S	R	L	M	Q	I	H	G	N	T	V	S	V	F	Y	T	D	V	A	F	N	R	D	A	N	A	N	N	I
Template Known Secondary structure									S	S			G	G	G	S		T	T									S	S		T	T	G	G	G	G	G	S	T	T	S			S												S	S	T	T	S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.												110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.															.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		N	G	R	N	F	L	V	T	A	P	.	.	.	.	.	.	.	.	.	.	.	S	I	E	G	P	W	S	E	P	I	P	M	G	N	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	P	S	L	F	H	D	D	D	.	.	G	R	K	Y	Y	I	Y	R	P	W	G	P	R	H	H	S	N
Query Conservation												.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		T	P	P	Q	A	I	I	T	Q	T	L	G	R	I	H	A	D	F	N	H	V	W	F	T	G	F	T	A	H	T	P	L	L	Q	P	D	G	V	L	Y	Q	N	G	A	Q	N	E	F	F	N	F	R	D	P	F	T	F	E	D	P	K	H	P	G	V	N	Y	M	V	F	E	G	N	T	A	G	Q	R	G	V
Template Known Secondary structure																			S	S																		S	S	S	B			T	T	T		T	T												T	T	S	T	T										B	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		153	.																															.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	I	V	L	Q	A	F	D	P	Q	T	G	T	L	S	P	E	R	K	T	L	F	T	G	T	P	.	L	C	Y	T	E	G	A	H	L	Y	R	H	A	G	W	Y	Y	L	M	A
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		A	N	C	T	E	A	D	L	G	F	R	P	N	D	P	N	A	E	T	L	Q	E	V	L	D	S	G	A	Y	Y	Q	K	A	N	I	G	L	A	I	A	T	D	S	T	L	S	K	W	K	F	L	S	P	L	I	S	A	N	C	V	N	D	Q	T	E	R	P	Q	V	Y	L	H	N	G	K	Y	Y	I	F	T
Template Known Secondary structure													T	T		T	T										T	T	G	G	G											S	S	T	T	S													T	T	T	B	S											T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		202	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																									.
Query SS confidence					.	.	.	.	.	.																									.
Query Sequence		A	E	G	.	.	.	.	.	.	G	T	S	Y	E	H	A	V	V	V	L	R	S	K	N	I	D	G	P	Y	E	L	H	P	.	D	V	T	M	M	T	S	W
Query Conservation					.	.	.	.	.	.																									.
Alig confidence					.	.	.	.	.	.																									.
Template Conservation
Template Sequence		I	S	H	R	T	T	F	A	A	G	V	D	G	P	D	G	V	Y	G	F	V	G	D	G	I	R	S	D	F	Q	P	M	N	Y	G	S	G	L	T	M	G	N
Template Known Secondary structure					G	G	G	B		T	T					S								S	S	S							S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions