Job Description P77713 Confidence 55.89% Date Wed Jan 25 15:21:12 GMT 2012 Rank 70 Aligned Residues 152 % Identity 14% Template c1ux6A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:thrombospondin-1; PDBTitle: structure of a thrombospondin c-terminal fragment reveals a2 novel calcium core in the type 3 repeats Resolution 1.9 Å

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		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.													430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure																																				.																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	T	V	A	R	R	W	Q	H	F	A	F	R	A	E	T	R	M	E	F	S	P	V	H	F	Q	Q	S	A	G	L	T	C	.	Y	Y	N	S	K	N	W	S	Y	C	F	V	D	Y	E	E	G	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	R	T	I	K	V	I	Q	L	D	H	N	V	P	S
Query Conservation																																				.																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	L	A	V	G	Y	D	E	F	N	A	V	D	F	S	G	T	F	F	I	N	T	E	R	D	D	D	Y	A	G	F	V	F	G	Y	Q	S	S	S	R	F	Y	V	V	M	W	K	Q	V	T	Q	S	Y	W	D	T	N	P	T	R	A	Q	G	Y	S	G	L	S	V	K	V	V	K	S	T	T	G	P	G
Template Known Secondary structure												S	S												S	S														T	T									S	S					S			S	S	S						S										S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		976	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.								.	.	470	.	.	.	.	.	.	.	.	.	480	.	.		.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.																.
Query SS confidence																								.	.	.	.	.	.	.																.
Query Sequence		W	P	L	H	E	Q	P	I	P	V	P	E	H	A	E	S	V	W	L	R	V	D	.	.	.	.	.	.	.	V	D	T	L	V	Y	R	Y	S	Y	S	F	D	G	E	.	T	W	H	T	V	P	V	T	Y	E	A	W	K	L	S	D	D	Y	I	G	G	R	G	F	F	T	G	A	F	V	G	L	H	C	E
Query Conservation																								.	.	.	.	.	.	.																.
Alig confidence																								.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		E	H	L	R	N	A	L	W	H	T	G	N	T	P	G	Q	V	R	T	L	W	H	D	P	R	H	I	G	W	K	D	F	T	A	Y	R	W	R	L	S	H	R	P	K	T	G	F	I	R	V	V	M	Y	E	G	K	K	I	M	A	D	S	G	P	I	Y	D	K	T	Y	A	G	G	R	L	G	L	F	V	F
Template Known Secondary structure										S	S	S		B	T	T	T								T	T						T	T											T	T	T	T									T	T													S
Template Predicted Secondary structure
Template SS confidence
		1056	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	S	G	D	G	C	Y	A	D	F	D	Y	F	T	Y	E
Query Conservation
Alig confidence						.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		S	Q	E	M	.	.	.	.	V	F	F	S	D	L	K	Y	E
Template Known Secondary structure		S		S	S	.	.	.	.
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		1136	.	.	.					1140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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