Return to main results Retrieve Phyre Job Id

Job DescriptionP75970
Confidence5.05%DateThu Jan 5 12:16:37 GMT 2012
Rank52Aligned Residues27
% Identity30%Templatec2khqA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of a phage integrase ssp19472 fragment 59-159 from staphylococcus saprophyticus,3 northeast structural genomics consortium target syr103b
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.. .......20.........30
Predicted Secondary structure  ...






Query SS confidence 








. . .

















Query Sequence  MLTLEEWAA. . . EKYRSNPPSVSTLRRYAK
Query Conservation 



 


 ...      


  






Alig confidence 








...

















Template Conservation   


      

   
       
   
  
Template Sequence  MITFADYFYQWYEVNKLPHVSESTKRHYES
Template Known Secondary structure 

BTGGGS
Template Predicted Secondary structure 






Template SS confidence 





























   1........10.........20.........30
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions