Job Description P27247 Confidence 100.00% Date Thu Jan 5 11:43:26 GMT 2012 Rank 4 Aligned Residues 278 % Identity 19% Template d2af4c1 SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Phosphotransacetylase Resolution 2.15

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	L	A	L	D	V	M	G	G	D	F	G	P	S	V	T	V	P	A	A	L	Q	A	L	N	S	N	S	Q	L	T	L	L	L	V	G	N	S	D	A	I	T	P	L	L	A	K	A	D	F	E	Q	R	S	R	L	Q	I	I	P	A	Q	S	V	I	A	S	D	A	R	P	S	Q	A	I	R	A	S
Query Conservation
Alig confidence								.	.	.	.	.																																												.
Template Conservation								.	.	.	.	.																																												.
Template Sequence		N	K	T	I	A	L	.	.	.	.	.	P	E	T	E	D	I	R	T	L	Q	A	A	A	K	I	L	E	R	G	I	A	D	I	V	L	V	G	N	E	A	D	I	K	A	L	A	G	D	L	D	L	S	K	.	A	K	I	V	D	P	K	T	Y	E	K	K	D	E	Y	I	N	A	F	Y	E	L	R	K	H
Template Known Secondary structure								.	.	.	.	.			T	T	S														T	S							S										S	S				T	T	.	S					T	T	S		T	T													G	G
Template Predicted Secondary structure								.	.	.	.	.																																												.
Template SS confidence
		16	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		83	.	.	.												.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																			.	.																																			.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.																			.	.																																			.	.	.	.
Query Sequence		R	G	S	S	.	.	.	.	.	.	.	.	.	.	.	M	R	V	A	L	E	L	V	K	E	G	R	A	Q	A	C	V	S	.	.	A	G	N	T	G	A	L	M	G	L	A	K	L	L	L	K	P	L	E	G	I	E	R	P	A	L	V	T	V	L	P	H	Q	Q	.	.	.	.	K	G	K	T	V	V	L
Query Conservation						.	.	.	.	.	.	.	.	.	.	.																			.	.																																			.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																			.	.																																			.	.	.	.
Template Conservation
Template Sequence		K	G	I	T	L	E	N	A	A	E	I	M	S	D	Y	V	Y	F	A	V	M	M	A	K	L	G	E	V	D	G	V	V	S	G	A	A	H	S	S	S	D	T	L	R	P	A	V	Q	I	V	K	T	A	K	G	A	A	L	A	S	A	F	F	I	I	S	V	P	D	E	Y	G	S	D	G	T	F	L	F	A
Template Known Secondary structure		G	T										T	T	S											T	T	S		S						T	T	S		S											T		B	S	T	T		S															T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																								.	.	.																							.
Query SS confidence																																								.	.	.																							.
Query Sequence		D	L	G	A	N	V	D	C	D	S	T	M	L	V	Q	F	A	I	M	G	S	V	L	A	E	E	V	V	E	I	P	N	P	R	V	A	L	L	.	.	.	N	I	G	E	E	E	V	K	G	L	D	S	I	R	D	A	S	A	V	L	K	T	.	I	P	S	I	N	Y	I	G	Y	L	E	A	N	E	L	L
Query Conservation																																								.	.	.																							.
Alig confidence																												.												.	.	.																							.
Template Conservation																												.
Template Sequence		D	S	G	M	V	E	M	P	S	V	E	D	V	A	N	I	A	V	I	S	A	K	T	F	E	L	.	L	V	Q	D	V	P	K	V	A	M	L	S	Y	S	T	K	G	S	A	K	S	K	L	T	E	A	T	I	A	S	T	K	L	A	Q	E	L	A	P	D	I	A	I	D	G	E	L	Q	V	D	A	A	I
Template Known Secondary structure		T	S	S	S		S	S																				.				S									S		S	T	T	S			S																		T	T	S
Template Predicted Secondary structure																												.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		222															.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	T	D	V	.	L	V	C	D	G	F	T	G	N	V	T	L	K	T	M	E	G	V	V	R	M	F	L	S	L	L	K	S	Q	G	E	G	K	K	R	S	W	W	L	L	L	L	K	R	W	L	Q	K	S	L	T	R	R	F	S	H	L	N	P
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.						.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	K	V	A	A	S	K	A	P	G	S	P	V	A	G	K	A	N	V	F	I	F	P	D	L	N	C	G	N	I	A	Y	K	I	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	A	K
Template Known Secondary structure										S	T	T		S	S	T	T	S							S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.																																								.	.	.	290
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	Y	N	G	A	C	L	L	G	L	R	G	T	V	I	K	S	H	G	A	A	N	Q	R	A	F	A	V	A	I	E	Q	A	V	Q	A	V	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	A	Y	G	P	I	T	Q	G	L	A	K	P	I	N	D	L	S	R	G	C	S	D	E	D	I	V	G	A	V	A	I	T	C	V	Q	A	A	A
Template Known Secondary structure											S	B	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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