Job Description P27247 Confidence 100.00% Date Thu Jan 5 11:43:26 GMT 2012 Rank 2 Aligned Residues 325 % Identity 36% Template d1vi1a_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PlsX-like Resolution 2.95

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	A	L	D	V	M	G	G	D	F	G	P	S	V	T	V	P	A	A	L	Q	A	L	N	S	N	S	Q	L	T	L	L	L	V	G	N	S	D	A	I	T	P	L	L	A	K	A	D	F	E	Q	R	S	R	L	Q	I	I	P	A	Q	S	V	I	A	S	D	A	R	P	S	Q	A	I	R	A	S	R
Query Conservation
Alig confidence																																																				.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		L	R	I	A	V	D	A	X	G	G	D	H	A	P	K	A	V	I	D	G	V	I	K	G	I	E	A	F	D	D	L	H	I	T	L	V	G	D	K	T	T	I	E	S	H	L	T	T	T	S	.	.	.	.	D	R	I	T	V	L	H	A	D	E	V	I	E	P	T	D	E	P	V	R	A	V	R	R	K	K
Template Known Secondary structure								S	S		S	S	S	T	T															T	T														T	T			S			.	.	.	.	T	T								B				T	T	S										T
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	S	M	R	V	A	L	E	L	V	K	E	G	R	A	Q	A	C	V	S	A	G	N	T	G	A	L	M	G	L	A	K	L	L	L	K	P	L	E	G	I	E	R	P	A	L	V	T	V	L	P	H	Q	Q	K	G	K	T	V	V	L	D	L	G	A	N	V	D	C	D	S	T	M	L	V	Q	F	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	S	X	V	L	X	A	Q	E	V	A	E	N	R	A	D	A	C	I	S	A	G	N	T	G	A	L	X	T	A	G	L	F	I	V	G	R	I	K	G	I	D	R	P	A	L	A	P	T	L	P	T	V	S	G	D	G	F	L	L	L	D	V	G	A	N	V	D	A	K	P	E	H	L	V	Q	Y	A	I
Template Known Secondary structure		T	B											T	T	S		S						S												T	T		B		T	T		S	S										S	S	S								S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	S	V	L	A	E	E	V	V	E	I	P	N	P	R	V	A	L	L	N	I	G	E	E	E	V	K	G	L	D	S	I	R	D	A	S	A	V	L	K	T	I	P	S	I	N	Y	I	G	Y	L	E	A	N	E	L	L	T	G	K	T	D	V	L	V	C	D	G	F	T	G	N	V	T	L	K	T	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	G	S	V	Y	S	Q	Q	V	R	G	V	T	S	P	R	V	G	L	L	N	V	G	T	E	D	K	K	G	N	E	L	T	K	Q	T	F	Q	I	L	K	E	T	A	N	I	N	F	I	G	N	V	E	A	R	D	L	L	D	D	V	A	D	V	V	V	T	D	G	F	T	G	N	V	T	L	K	T	L	E
Template Known Secondary structure										T	S			S	S								S	S	S	S	T	T		S													S		T	T	S								G	G	G	G	G	G	T	S		S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	V	R	M	F	L	S	L	L	K	S	Q	G	E	G	K	K	R	S	W	W	L	L	L	L	K	R	W	L	Q	K	S	L	T	R	R	F	S	H	L	N	P	D	Q	Y	N	G	A	C	L	L	G	L	R	G	T	V	I	K	S	H	G	A	A	N	Q	R	A	F	A	V	A	I	E	Q	A	V	Q	A
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	A	L	S	I	F	K	X	X	R	D	V	X	T	S	T	.	.	.	.	.	.	.	.	.	.	L	V	L	K	P	K	L	K	E	X	K	X	K	X	E	Y	S	N	Y	G	G	A	S	L	F	G	L	K	A	P	V	I	K	A	H	G	S	S	D	S	N	A	V	F	R	A	I	R	Q	A	R	E	X
Template Known Secondary structure																T	T	T	.	.	.	.	.	.	.	.	.	.																G	G	G	S							T	B	S	S							T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.											.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	R	Q	V	P	Q	R	I	A	A	R	L	E	S	V	Y	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	Q	N	V	A	A	L	I	Q	E	E	V	K	E	E	K	T	D
Template Known Secondary structure				T	T									T	S					T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions