Job Description P27247 Confidence 100.00% Date Thu Jan 5 11:43:26 GMT 2012 Rank 1 Aligned Residues 315 % Identity 37% Template d1u7na_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PlsX-like Resolution 2.26

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	L	D	V	M	G	G	D	F	G	P	S	V	T	V	P	A	A	L	Q	A	L	N	S	N	S	Q	L	T	L	L	L	V	G	N	S	D	A	I	T	P	L	L	A	K	A	D	F	E	Q	R	S	R	L	Q	I	I	P	A	Q	S	V	I	A	S	D	A	R	P	S	Q	A	I	R	A	S	R	G
Query Conservation
Alig confidence																																																		.	.	.	.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		K	I	A	V	D	A	X	G	G	D	N	A	P	Q	A	I	V	E	G	V	X	L	A	K	Q	D	F	P	D	I	E	F	Q	L	Y	G	K	E	A	E	I	K	K	Y	I	T	D	E	.	.	.	.	.	K	N	I	T	I	I	H	T	D	E	K	I	A	S	D	D	E	P	V	K	A	I	R	R	K	K	T
Template Known Secondary structure							S	S		S	T	T	T	T															T	T														T	T		S			.	.	.	.	.	T	T							S					T	T											T	T
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		S	S	M	R	V	A	L	E	L	V	K	E	G	R	A	Q	A	C	V	S	A	G	N	T	G	A	L	M	G	L	A	K	L	L	L	K	P	L	E	G	I	E	R	P	A	L	V	T	V	L	P	H	Q	.	.	Q	K	G	K	T	V	V	L	D	L	G	A	N	V	D	C	D	S	T	M	L	V	Q	F	A
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		A	S	X	V	L	A	A	Q	A	V	K	N	G	E	A	D	A	I	F	S	A	G	N	T	G	A	L	L	A	A	G	L	F	I	V	G	R	I	K	N	V	E	R	P	G	L	X	S	T	L	P	V	X	G	E	P	D	K	G	F	D	X	L	D	L	G	A	N	A	D	N	K	P	E	H	L	V	Q	Y	A
Template Known Secondary structure		S												T	S		S					S	S												T	T		B		T	T		S	S										T	T		T	T								S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	G	S	V	L	A	E	E	V	V	E	I	P	N	P	R	V	A	L	L	N	I	G	E	E	E	V	K	G	L	D	S	I	R	D	A	S	A	V	L	K	T	I	P	S	I	N	Y	I	G	Y	L	E	A	N	E	L	L	T	G	K	T	D	V	L	V	C	D	G	F	T	G	N	V	T	L	K	T	M
Query Conservation
Alig confidence																										.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		V	L	G	S	F	Y	A	E	K	V	R	N	V	Q	N	P	R	V	G	L	L	N	N	G	.	.	.	.	T	G	S	E	L	T	K	K	A	F	E	L	L	A	A	D	E	T	I	N	F	V	G	N	V	E	A	R	E	L	L	N	G	V	A	D	V	V	V	T	D	G	F	T	G	N	A	V	L	K	S	I
Template Known Secondary structure											T	T			S	S								S		.	.	.	.																	T	T	S								G	G	G	G	G	G		S		S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	V	V	R	M	F	L	S	L	L	K	S	Q	G	E	G	K	K	R	S	W	W	L	L	L	L	K	R	W	L	Q	K	S	L	T	R	R	F	S	H	L	N	P	D	Q	Y	N	G	A	C	L	L	G	L	R	G	T	V	I	K	S	H	G	A	A	N	Q	R	A	F	A	V	A	I	E	Q	A	V	Q
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		E	G	T	A	X	N	X	X	S	L	L	K	T	A	I	L	S	.	.	.	.	.	.	.	.	.	G	A	L	L	L	K	N	A	L	H	G	X	K	D	E	X	D	Y	S	K	H	G	G	A	V	L	F	G	L	K	A	P	V	I	K	T	H	G	A	T	G	P	D	A	V	R	Y	T	I	R	Q	I	H	T
Template Known Secondary structure																	T		.	.	.	.	.	.	.	.	.																T		G	G	G	G							T	B	S	S							T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.										.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Q	R	Q	V	P	Q	R	I	A	A	R	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	L	E	T	Q	V	V	P	Q	L	V	E	Y	Y	E
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions