Job Description P27247 Confidence 98.40% Date Thu Jan 5 11:43:26 GMT 2012 Rank 13 Aligned Residues 217 % Identity 20% Template c2hi1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 2; PDBTitle: the structure of a putative 4-hydroxythreonine-4-phosphate2 dehydrogenase from salmonella typhimurium. Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.											.	70	.	.	.
Predicted Secondary structure																																														.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	A	L	D	V	M	G	G	D	F	G	P	S	V	T	V	P	A	A	L	Q	A	L	N	S	N	S	Q	L	T	L	L	L	V	G	N	S	D	A	I	T	P	L	.	L	A	K	A	D	F	E	Q	R	S	R	L	Q	I	I	P	A	Q	S	V	.	.	.	.	.	.	.	.	.	.	I	A	S	D	A
Query Conservation																																														.																					.	.	.	.	.	.	.	.	.	.
Alig confidence						.																																								.										.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																																		.	.
Template Sequence		T	V	A	I	.	T	X	G	D	P	A	G	I	G	P	E	I	I	V	K	A	L	S	E	D	G	L	N	G	A	P	L	V	V	I	G	C	L	A	T	L	K	R	L	Q	A	K	G	I	T	P	N	V	E	.	.	L	R	A	I	E	R	V	A	E	A	R	F	A	P	G	I	I	H	V	I	D	E	P	L
Template Known Secondary structure						.					T	T	T	T										T	S	T	T	T	T	T		S																T	T	S	S					.	.					S	S	G	G	G					T	T
Template Predicted Secondary structure						.																																																		.	.
Template SS confidence
		5	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		74	.	.	.	.	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																				.										.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																				.										.	.	.	.	.	.
Query Sequence		R	P	S	Q	A	I	R	A	S	R	G	S	S	.	.	.	.	.	.	.	.	.	M	R	V	A	L	E	L	V	K	E	G	R	A	Q	A	C	V	S	A	.	G	N	T	G	A	L	M	G	L	.	.	.	.	.	.	A	K	L	L	L	K	P	L	E	G	I	E	R	P	A	L	V	T	V	L	P	H	Q
Query Conservation															.	.	.	.	.	.	.	.	.																				.										.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																				.										.	.	.	.	.	.
Template Conservation
Template Sequence		A	Q	P	E	A	L	E	A	G	K	V	Q	A	Q	A	G	D	L	A	Y	R	C	V	K	R	A	T	E	L	A	L	R	G	D	V	Q	A	I	A	T	A	P	L	N	K	E	A	L	H	L	A	G	H	N	Y	P	G	H	T	E	L	L	A	T	L	T	H	S	R	D	Y	A	X	V	L	Y	T	D	K	L
Template Known Secondary structure		S		G	G	G			T	T	S																						T	T	S		S															T	T				S	S									T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		138	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																																									.	.	.	.											.	.	.
Query SS confidence										.	.	.	.	.	.																																									.	.	.	.											.	.	.
Query Sequence		Q	K	G	K	T	V	V	L	.	.	.	.	.	.	D	L	G	A	N	V	D	C	D	S	T	M	L	V	Q	F	A	I	M	G	S	V	L	A	E	E	V	V	E	I	P	N	P	R	V	A	L	L	N	I	.	.	.	.	G	E	E	E	V	K	G	L	D	S	.	.	.	I	R	D	A	S	A	V	L	K
Query Conservation										.	.	.	.	.	.																																									.	.	.	.											.	.	.
Alig confidence		.	.							.	.	.	.	.	.									.	.																	.														.	.	.	.											.	.	.
Template Conservation		.	.																					.	.																	.
Template Sequence		.	.	K	V	I	H	V	S	T	H	I	A	L	R	K	F	L	D	T	L	S	T	.	.	A	R	V	E	T	V	I	G	I	A	D	T	F	L	K	R	.	V	G	Y	V	K	P	R	I	A	V	A	G	V	N	P	H	A	G	E	N	G	L	F	G	D	E	E	T	R	I	L	T	P	A	I	T	D	A	R
Template Known Secondary structure		.	.					S			S	S												.	.																	.	T	T		S	S								S	S	G	G	G	S	S	T	T	S								T
Template Predicted Secondary structure		.	.																					.	.																	.
Template SS confidence
				162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		T	I	P	S	I	N	Y	I	G	Y	L	E	A	N	E	L	L	.	.	.	.	T	G	K	T	D	V	L	V	C
Query Conservation																			.	.	.	.
Alig confidence				.															.	.	.	.
Template Conservation				.
Template Sequence		A	K	.	G	X	D	V	Y	G	P	C	P	P	D	T	V	F	L	Q	A	Y	E	G	Q	Y	D	X	V	V	A
Template Known Secondary structure		T	T	.	T																		T	T	S		S
Template Predicted Secondary structure				.
Template SS confidence
		237	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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