Job Description P0A8R4 Confidence 21.32% Date Wed Jan 25 15:20:19 GMT 2012 Rank 93 Aligned Residues 32 % Identity 16% Template c1y4mC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:herv-frd_6p24.1 provirus ancestral env polyprotein; PDBTitle: crystal structure of human endogenous retrovirus herv-frd envelope2 protein (syncitin-2) Resolution 1.60 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	L	E	S	R	L	A	F	Q	E	I	T	I	E	E	L	N	V	T	V	T	A	H	E	M	E	M	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	T	M	A	K	A	L	T	T	M	Q	E	Q	I	D	S	L	A	A	V	V	L	Q	N	R	R	G	L	D	M	L
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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