Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8R4
Confidence61.46%DateWed Jan 25 15:20:19 GMT 2012
Rank30Aligned Residues51
% Identity14%Templatec1n73C_
PDB info PDB header:blood clottingChain: C: PDB Molecule:fibrin gamma chain; PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50..
Predicted Secondary structure 
Query SS confidence 


















































Query Sequence  QDLSLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDHLRLLTEKL
Query Conservation      

 

  

  




 


 

  
  

  
  
  

  
  

Alig confidence 


















































Template Conservation   
  


 
  
          
  
             
      
    
Template Sequence  TVQKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTC
Template Known Secondary structure  ST
Template Predicted Secondary structure 
Template SS confidence 


















































   84.....90.........100.........110.........120.........130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions