Job Description P76134 Confidence 97.17% Date Thu Jan 5 12:19:23 GMT 2012 Rank 14 Aligned Residues 149 % Identity 12% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	S	Q	F	T	H	E	K	W	M	D	D	S	T	L	K	E	F	I	K	Q	Y	I	A	A	S	G	N	Q	V	Y	F	T	W	Q	G	G	E	P	T	L	A	G	L	D	F	F	R	K	V	I	H	Y	Q	Q	R	Y	A	G	Q	K	R	I	F	N	A	L	Q	T	N	G	I	L	L	N	N	E	W	C
Query Conservation
Alig confidence																																			.	.	.	.									.	.																									.	.	.	.	.
Template Conservation																																			.	.	.	.									.	.																									.	.	.	.	.
Template Sequence		R	E	G	E	Q	F	A	N	A	F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	.	.	.	.	T	S	P	V	A	S	E	Q	.	.	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	.	.	.	.	.	M	D	D	A
Template Known Secondary structure		T	G	G	G	G	S	T	T																			T		S					.	.	.	.			G	G	G				.	.										T	S			S	S								S		.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.									.	.																									.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		A	F	L	K	E	H	E	F	L	V	G	I	S	I	D	G	P	Q	E	L	H	D	R	Y	R	R	S	N	S	G	N	G	T	F	A	K	V	I	A	A	I	E	R	L	K	S	Y	Q	V	E	F	N	T	L	T	V	.	I	N	N	V	N	V	H	Y	P	L	E	V	Y	H	F	L	K	S	I	G	S	K	H
Query Conservation																																																										.
Alig confidence																											.	.																														.
Template Conservation																											.	.
Template Sequence		R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	.	.	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R
Template Known Secondary structure							T	T		S								G	G	G							.	.																				T	T								T	T	G	G	G	S																		S
Template Predicted Secondary structure																											.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		183	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		192	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions